Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU75859 | Sorghum | peroxisome | 94.3 | 94.3 |
| Zm00001d045295_P001 | Maize | extracellular | 92.14 | 88.59 |
| Os06t0158000-01 | Rice | plasma membrane | 77.5 | 81.79 |
| TraesCS7D01G110700.1 | Wheat | peroxisome | 79.97 | 79.85 |
| TraesCS7B01G012700.1 | Wheat | peroxisome | 79.82 | 79.69 |
| TraesCS7A01G115900.1 | Wheat | peroxisome | 76.58 | 78.76 |
| HORVU7Hr1G024350.1 | Barley | endoplasmic reticulum, vacuole | 79.51 | 72.27 |
| KXG27302 | Sorghum | cytosol | 5.86 | 70.37 |
| EES01271 | Sorghum | peroxisome | 69.34 | 67.98 |
| EES01192 | Sorghum | peroxisome | 67.18 | 66.56 |
| PGSC0003DMT400000613 | Potato | peroxisome | 64.56 | 63.87 |
| Solyc01g095750.2.1 | Tomato | peroxisome | 64.1 | 62.93 |
| OQU82479 | Sorghum | peroxisome | 65.18 | 58.51 |
| KXG28707 | Sorghum | peroxisome | 56.55 | 55.19 |
| KXG21217 | Sorghum | peroxisome | 51.31 | 49.7 |
| EES15543 | Sorghum | peroxisome | 38.67 | 36.8 |
| KXG27718 | Sorghum | peroxisome | 38.37 | 35.72 |
| OQU82968 | Sorghum | endoplasmic reticulum, plasma membrane | 32.82 | 30.56 |
| KXG23059 | Sorghum | endoplasmic reticulum | 32.82 | 30.52 |
| KXG27640 | Sorghum | peroxisome | 32.51 | 29.06 |
| KXG37146 | Sorghum | plastid | 23.73 | 20.87 |
Protein Annotations
| EnsemblPlants:KXG19348 | EnsemblPlantsGene:SORBI_3010G045500 | Gene3D:3.40.50.12780 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | PANTHER:PTHR43272 | PANTHER:PTHR43272:SF18 | PFAM:PF00501 |
| ProteinID:KXG19348 | ProteinID:KXG19348.1 | ScanProsite:PS00455 | SUPFAM:SSF56801 | UniParc:UPI0007F2F592 | UniProt:A0A194YHC1 |
| MapMan:50.6.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:3549457..3557656
Molecular Weight (calculated)
72520.7 Da
IEP (calculated)
6.213
GRAVY (calculated)
-0.082
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: MKHLVEVEPA TATTGPAYRN ARAKDGLLQA PPGLHSCWDI FRTSVEKYPD NPMLGRRRVV DGKASDYTWV TYKEVYDDVM KLAASIDKSG IKQGEGCGIY
101: GANCPEWIIS MEACNALGVC CVPLYDSLGA GAVEFIICHA EIQIAFVEEK KITELLKTCH ATSKYLKTVI SFGGVTNDHR DEARNHGLSI FSWEEFLVMG
201: GSHNFDLPEK KRSDICTVMY TSGTTGDPKG VMISNESLLV NIVGPDSVLQ YIGEVIDQDD VYLSYLPLAH VFDRMFEEVF IHHGSKIGFW CGDVKLLVDD
301: IEALKPTLFC AVPRVLDRIY SGLTTRILSG GILKKTLFNI AYKMKLDNMR KGIKHETAAP FFDKLVFSKV KERLGGKLRL IISGGAPLAV PVEEFLRVVT
401: CAYVVQGYGL TETCAGSIVS IPNEYSMLGT VGPPVPHIDV RLESVPEMGY DALSTVPRGE ICIRGSVLFS GYYKREDLVQ EVMIDGWFHT GDIGEWQPDG
501: SLKVIDRKKN IFKLSQGEYV AVENLENVYG VLQDIDSIWV YGNSFESSLV AVVNPNQQAL ERWAEQYNII GSFAELCEHS RAKEHIIAEL TKIAKEKKLK
601: GFEFIKAIHL DPLSFDIERD LITPTYKKKR PQMLKYYQGV IDALYKSMK
101: GANCPEWIIS MEACNALGVC CVPLYDSLGA GAVEFIICHA EIQIAFVEEK KITELLKTCH ATSKYLKTVI SFGGVTNDHR DEARNHGLSI FSWEEFLVMG
201: GSHNFDLPEK KRSDICTVMY TSGTTGDPKG VMISNESLLV NIVGPDSVLQ YIGEVIDQDD VYLSYLPLAH VFDRMFEEVF IHHGSKIGFW CGDVKLLVDD
301: IEALKPTLFC AVPRVLDRIY SGLTTRILSG GILKKTLFNI AYKMKLDNMR KGIKHETAAP FFDKLVFSKV KERLGGKLRL IISGGAPLAV PVEEFLRVVT
401: CAYVVQGYGL TETCAGSIVS IPNEYSMLGT VGPPVPHIDV RLESVPEMGY DALSTVPRGE ICIRGSVLFS GYYKREDLVQ EVMIDGWFHT GDIGEWQPDG
501: SLKVIDRKKN IFKLSQGEYV AVENLENVYG VLQDIDSIWV YGNSFESSLV AVVNPNQQAL ERWAEQYNII GSFAELCEHS RAKEHIIAEL TKIAKEKKLK
601: GFEFIKAIHL DPLSFDIERD LITPTYKKKR PQMLKYYQGV IDALYKSMK
001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA
Arabidopsis Description
LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.