CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024723_P001	Maize	peroxisome	94.63	94.63
TraesCS1A01G075000.1	Wheat	golgi	85.22	85.22
TraesCS1B01G093600.1	Wheat	peroxisome	85.22	85.22
TraesCS1D01G077600.1	Wheat	golgi	85.22	85.22
Os05t0132100-02	Rice	plasma membrane	82.54	82.66
Zm00001d010943_P001	Maize	peroxisome	16.57	78.72
HORVU1Hr1G016200.16	Barley	peroxisome	84.93	72.95
GSMUA_Achr8P10780_001	Banana	peroxisome	70.15	70.78
VIT_07s0005g01790.t01	Wine grape	peroxisome	64.18	64.95
PGSC0003DMT400023374	Potato	peroxisome	63.43	64.3
KRG96554	Soybean	peroxisome	63.28	64.05
KRH68292	Soybean	endoplasmic reticulum	63.28	64.05
KRH69184	Soybean	peroxisome	62.84	63.79
KRH31765	Soybean	peroxisome	62.54	63.48
CDY51419	Canola	peroxisome	61.49	62.42
Bra021392.1-P	Field mustard	peroxisome	61.49	62.42
AT2G47240.2	Thale cress	peroxisome	61.49	62.42
CDY69216	Canola	peroxisome	38.36	62.38
CDY27501	Canola	peroxisome	60.75	61.67
CDY37793	Canola	peroxisome	38.81	60.32
CDX80093	Canola	peroxisome	38.81	60.32
CDY68722	Canola	peroxisome	25.22	59.51
CDX80092	Canola	mitochondrion, peroxisome	25.97	59.39
Bra004467.1-P	Field mustard	peroxisome	60.9	58.54
CDY71490	Canola	extracellular, peroxisome	13.28	57.79
KRH66241	Soybean	peroxisome	30.15	57.39
CDY72011	Canola	peroxisome	18.06	57.35
CDX95713	Canola	peroxisome	55.97	54.74
OQU75859	Sorghum	peroxisome	50.45	52.08
KXG19348	Sorghum	peroxisome	49.7	51.31
EES01192	Sorghum	peroxisome	48.66	49.77
EES01271	Sorghum	peroxisome	48.36	48.94
KXG27302	Sorghum	cytosol	3.88	48.15
KXG28707	Sorghum	peroxisome	47.76	48.12
OQU82479	Sorghum	peroxisome	46.27	42.88
KXG27718	Sorghum	peroxisome	37.01	35.58
EES15543	Sorghum	peroxisome	35.97	35.34
KXG23059	Sorghum	endoplasmic reticulum	32.39	31.09
OQU82968	Sorghum	endoplasmic reticulum, plasma membrane	31.34	30.13
KXG27640	Sorghum	peroxisome	30.45	28.1
KXG37146	Sorghum	plastid	24.78	22.49

Protein Annotations

Gene3D:3.40.50.12780	MapMan:50.6.2	UniProt:A0A1B6P687	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	GO:GO:0001676
GO:GO:0003674	GO:GO:0003824	GO:GO:0004467	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0010025	GO:GO:0010143	GO:GO:0031957	EnsemblPlants:KXG21217	ProteinID:KXG21217
ProteinID:KXG21217.1	PFAM:PF00501	ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF6	EnsemblPlantsGene:SORBI_3009G031400
SUPFAM:SSF56801	UniParc:UPI0001C806E2	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:2775343..2780568

Molecular Weight (calculated)

74993.6 Da

IEP (calculated)

7.137

GRAVY (calculated)

-0.200

Length

670 amino acids

Sequence
(BLAST)

001: MEANPKNVFT IKVEDGKPGK DGQPAVGPVF RSVLAKDGFP VLEPDMQTSW DVFRVAVGKY PNNRMLGWRP FKDGVPGPYL WKSYKEIYDE VLQAGSALQH
101: LGVQPGSRVG IYGANCPQWI VAMEACNANS LICVPLYDTL GAGAVDYIIN HAEIDVVFIQ DKKIKEILSP NCKSAKRLKA LVAFTSATSE QIKEADNFGM
201: KMYAWNDFLK VGKDNPHQPC PPQASDICTI MYTSGTSGQP KGVMLTHESH AMYVKGVDLF MDQFDDKMTT DDVFLSFLPL AHILDRMIEE YFFHKGASIG
301: YYHGDLNALR DDIVELKPTL LVGVPRVYER IYEGILKAIA ELRPLRRVIF NALYNRKLAS MKAGYSHKTA SPFADMLAFR KVKARLGGRL RLLISGGAPL
401: SNEIEEFMRV TTCAYFIQGY GLTETLGPST VCYIDDMALV GSAGVPATYT EIRLEEVPEM GYDPLGVPSR GEICIHGKSL FAGYYKSPEL TNEAIVDGWF
501: HTGDIGEMTP DGILKVIDRK KNIFKLSQGE YVAVEYLEKV YGFPPLVEDI WVYGDSFRSS LVAVVNPHEE NTMKWAHSNG YKGSFAEICK LEGLKEYILK
601: ELAAVAQKNK LRGFEYIKGI VLDPVPFDIE RDLVTATMKK RRKNMQNYYQ SEIDIVYKKL EAQKNAAKSK

Best Arabidopsis Sequence Match ( AT2G47240.3 )
(BLAST)

001: MKSFAAKVEE GVKGIDGKPS VGPVYRNLLS EKGFPPIDSE ITTAWDIFSK SVEKFPDNNM LGWRRIVDEK VGPYMWKTYK EVYEEVLQIG SALRAAGAEP
101: GSRVGIYGVN CPQWIIAMEA CAAHTLICVP LYDTLGSGAV DYIVEHAEID FVFVQDTKIK GLLEPDCKCA KRLKAIVSFT NVSDELSHKA SEIGVKTYSW
201: IDFLHMGREK PEDTNPPKAF NICTIMYTSG TSGDPKGVVL THQAVATFVV GMDLYMDQFE DKMTHDDVYL SFLPLAHILD RMNEEYFFRK GASVGYYHGN
301: LNVLRDDIQE LKPTYLAGVP RVFERIHEGI QKALQELNPR RRFIFNALYK HKLAWLNRGY SHSKASPMAD FIAFRKIRDK LGGRIRLLVS GGAPLSPEIE
401: EFLRVTCCCF VVQGYGLTET LGGTALGFPD EMCMLGTVGI PAVYNEIRLE EVSEMGYDPL GENPAGEICI RGQCMFSGYY KNPELTEEVM KDGWFHTGDI
501: GEILPNGVLK IIDRKKNLIK LSQGEYVALE HLENIFGQNS VVQDIWVYGD SFKSMLVAVV VPNPETVNRW AKDLGFTKPF EELCSFPELK EHIISELKST
601: AEKNKLRKFE YIKAVTVETK PFDVERDLVT ATLKNRRNNL LKYYQVQIDE MYRKLASKKI

Arabidopsis Description

LACS1Long chain acyl-CoA synthetase 1 [Source:UniProtKB/Swiss-Prot;Acc:O22898]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.