Factsheet for HORVU1Hr1G016200.16

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
TargetP:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G027510.1	Barley	cytosol	6.92	100.0
TraesCS1D01G077600.1	Wheat	golgi	84.62	98.51
TraesCS1A01G075000.1	Wheat	golgi	84.49	98.36
TraesCS1B01G093600.1	Wheat	peroxisome	84.49	98.36
Os05t0132100-02	Rice	plasma membrane	73.33	85.5
KXG21217	Sorghum	peroxisome	72.95	84.93
Zm00001d024723_P001	Maize	peroxisome	72.82	84.78
GSMUA_Achr8P10780_001	Banana	peroxisome	60.64	71.23
Zm00001d010943_P001	Maize	peroxisome	12.69	70.21
VIT_07s0005g01790.t01	Wine grape	peroxisome	56.79	66.92
KRG96554	Soybean	peroxisome	55.26	65.11
KRH68292	Soybean	endoplasmic reticulum	55.26	65.11
PGSC0003DMT400023374	Potato	peroxisome	54.87	64.75
KRH69184	Soybean	peroxisome	53.72	63.48
KRH31765	Soybean	peroxisome	53.46	63.18
CDY69216	Canola	peroxisome	33.08	62.62
AT2G47240.2	Thale cress	peroxisome	52.69	62.27
CDY51419	Canola	peroxisome	52.56	62.12
Bra021392.1-P	Field mustard	peroxisome	52.56	62.12
CDY27501	Canola	peroxisome	51.92	61.36
CDY37793	Canola	peroxisome	33.46	60.56
CDX80093	Canola	peroxisome	33.46	60.56
CDY68722	Canola	peroxisome	21.54	59.15
CDX80092	Canola	mitochondrion, peroxisome	22.05	58.7
Bra004467.1-P	Field mustard	peroxisome	52.31	58.54
CDY72011	Canola	peroxisome	15.64	57.82
CDY71490	Canola	extracellular, peroxisome	11.41	57.79
KRH66241	Soybean	peroxisome	25.13	55.68
CDX95713	Canola	peroxisome	47.56	54.16
HORVU3Hr1G059140.1	Barley	peroxisome	40.38	47.87
HORVU5Hr1G046950.26	Barley	peroxisome	41.03	46.99
HORVU5Hr1G099350.15	Barley	peroxisome	40.13	46.86
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	41.41	45.24
HORVU5Hr1G040740.17	Barley	peroxisome	30.9	33.71
HORVU4Hr1G025820.9	Barley	peroxisome, plastid	31.79	33.07
HORVU4Hr1G019780.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	28.33	31.71
HORVU5Hr1G036460.1	Barley	endoplasmic reticulum	27.56	30.8
HORVU5Hr1G052100.13	Barley	peroxisome	25.64	27.21
HORVU5Hr1G120850.1	Barley	plastid	21.67	24.67
HORVU1Hr1G032500.2	Barley	peroxisome	3.72	18.35

Protein Annotations

Gene3D:3.40.50.12780	MapMan:50.6.2	UniProt:A0A287EQS1	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004467	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0010025	GO:GO:0010143	GO:GO:0031957	EnsemblPlantsGene:HORVU1Hr1G016200	EnsemblPlants:HORVU1Hr1G016200.16
PFAM:PF00501	ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF6	SUPFAM:SSF56801	UniParc:UPI000B475588
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:50046168..50054292

Molecular Weight (calculated)

87217.6 Da

IEP (calculated)

8.991

GRAVY (calculated)

-0.196

Length

780 amino acids

Sequence
(BLAST)

001: HAISTPRLIL GSFSFRPRLS KPLSLSLSLS KPGARRFWLS QAGLPGGSFS LEAHNPAWLS PRAFAYIGRK LSPLGISSRG ARYCCLPGFF SSLIQAILWL
101: PQAHFFSWRM EGTKKQVFTI QVEDGKPGKD GRPAVGPVFR NILAKDGFPP LDPDMRTSWD VFRTAAGKYP DNRMLGWRPF KDGVPGPYLW KSYKDVYEEV
201: LQIGSALQQL GVQPGSRVGI YGSNCPQWVV AMQVACNGYS IICVPLYDTL GAGAVDYIID HAEIDVVFIQ DKKIKEILSP NCTSATRLKA LVAFTSANNE
301: QIKDAEQIGM KVYSWNDFLK MGKDKPVQPR PPQPNDTCTI MYTSGTSGQP KGVMLSHESH GMYVKGVDLF MDQFEDKMST EDVFLSFLPL AHILDRMIEE
401: YFFHKGASVG YYHGDLNALR DDLMELKPTL LVGVPRVYEK IYEGILKALA DLRPLRRVIF NALYNRKLAG MKAGYTQKTA SPFADMLAFR KVKARLGGRL
501: RLLISGGAPL STEIEEFLRV TSCAYFIQGY GLTETLGPST VGYPDDMSLV GTAGVAATFT ELRLEEVPEM GYDPLGVPSR GEILIRGTTV FTGYYKNPEL
601: TNEVMVDGWF HTGDIGEMTP DGILKVIDRK KNIFKLSQGE YVAVEYLEKV YVFPPIIEDI WVYGDSYKSM LVAVVNPHEE NTMKWAGSNG YKGSFSEICK
701: SEGLKEHILK ELAAAAQKNK LRGFEYIKGV MLDPVPFDIE RDLVTATMKK RRNYMLKYYQ PEIDKVYKTL EGQRAASKAK

Best Arabidopsis Sequence Match ( AT2G47240.3 )
(BLAST)

001: MKSFAAKVEE GVKGIDGKPS VGPVYRNLLS EKGFPPIDSE ITTAWDIFSK SVEKFPDNNM LGWRRIVDEK VGPYMWKTYK EVYEEVLQIG SALRAAGAEP
101: GSRVGIYGVN CPQWIIAMEA CAAHTLICVP LYDTLGSGAV DYIVEHAEID FVFVQDTKIK GLLEPDCKCA KRLKAIVSFT NVSDELSHKA SEIGVKTYSW
201: IDFLHMGREK PEDTNPPKAF NICTIMYTSG TSGDPKGVVL THQAVATFVV GMDLYMDQFE DKMTHDDVYL SFLPLAHILD RMNEEYFFRK GASVGYYHGN
301: LNVLRDDIQE LKPTYLAGVP RVFERIHEGI QKALQELNPR RRFIFNALYK HKLAWLNRGY SHSKASPMAD FIAFRKIRDK LGGRIRLLVS GGAPLSPEIE
401: EFLRVTCCCF VVQGYGLTET LGGTALGFPD EMCMLGTVGI PAVYNEIRLE EVSEMGYDPL GENPAGEICI RGQCMFSGYY KNPELTEEVM KDGWFHTGDI
501: GEILPNGVLK IIDRKKNLIK LSQGEYVALE HLENIFGQNS VVQDIWVYGD SFKSMLVAVV VPNPETVNRW AKDLGFTKPF EELCSFPELK EHIISELKST
601: AEKNKLRKFE YIKAVTVETK PFDVERDLVT ATLKNRRNNL LKYYQVQIDE MYRKLASKKI

Arabidopsis Description

LACS1Long chain acyl-CoA synthetase 1 [Source:UniProtKB/Swiss-Prot;Acc:O22898]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.