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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • peroxisome 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
Plant-mPloc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021392.1-P Field mustard peroxisome 100.0 100.0
CDY27501 Canola peroxisome 98.03 98.03
AT2G47240.2 Thale cress peroxisome 91.97 91.97
CDY68722 Canola peroxisome 38.79 90.14
CDX80092 Canola mitochondrion, peroxisome 40.0 90.1
CDY72011 Canola peroxisome 28.33 88.63
CDY69216 Canola peroxisome 51.67 82.77
CDY71490 Canola extracellular, peroxisome 19.09 81.82
CDY37793 Canola peroxisome 51.97 79.58
CDX80093 Canola peroxisome 51.97 79.58
CDX95713 Canola peroxisome 82.42 79.42
KRH68292 Soybean endoplasmic reticulum 68.94 68.73
KRG96554 Soybean peroxisome 68.48 68.28
KRH69184 Soybean peroxisome 66.82 66.82
KRH31765 Soybean peroxisome 66.21 66.21
VIT_07s0005g01790.t01 Wine grape peroxisome 65.91 65.71
GSMUA_Achr8P10780_001 Banana peroxisome 63.18 62.8
PGSC0003DMT400023374 Potato peroxisome 62.73 62.63
KXG21217 Sorghum peroxisome 62.42 61.49
TraesCS1B01G093600.1 Wheat peroxisome 62.27 61.34
Zm00001d024723_P001 Maize peroxisome 62.12 61.19
TraesCS1A01G075000.1 Wheat golgi 61.97 61.04
TraesCS1D01G077600.1 Wheat golgi 61.82 60.9
Os05t0132100-02 Rice plasma membrane 61.21 60.39
KRH66241 Soybean peroxisome 28.94 54.26
HORVU1Hr1G016200.16 Barley peroxisome 62.12 52.56
Zm00001d010943_P001 Maize peroxisome 11.06 51.77
CDX86825 Canola peroxisome 48.94 48.5
CDY47618 Canola peroxisome 48.94 48.43
CDY03515 Canola peroxisome 48.79 48.28
CDX94232 Canola peroxisome 45.45 45.39
CDY25270 Canola peroxisome 45.15 45.22
CDY59237 Canola peroxisome 45.0 44.59
CDY29350 Canola peroxisome 44.55 44.14
CDY40856 Canola peroxisome 48.94 44.07
CDY46530 Canola peroxisome 49.7 41.73
CDY27725 Canola plastid 38.03 36.54
CDY05217 Canola plastid 38.03 36.54
CDX92843 Canola peroxisome 11.82 36.45
CDX74115 Canola plastid 37.73 35.78
CDY49993 Canola mitochondrion 37.73 35.78
CDY64879 Canola peroxisome 50.15 34.48
CDX86151 Canola peroxisome 36.06 34.05
CDX80638 Canola peroxisome 35.91 33.91
CDY65251 Canola peroxisome 11.06 31.2
CDX79212 Canola endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 32.12 30.59
CDX68052 Canola endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 31.82 30.3
CDY15082 Canola peroxisome 31.06 28.63
CDY66248 Canola peroxisome 31.06 28.43
CDY67321 Canola plastid 25.0 22.98
CDY53212 Canola plastid 24.85 21.93
CDY01190 Canola plastid 23.48 21.56
CDY12731 Canola plastid 22.88 20.83
Protein Annotations
EnsemblPlants:CDY51419EnsemblPlantsGene:GSBRNA2T00003354001Gene3D:3.40.50.12780GO:A0A078IPS6GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152InterPro:AMP-binding_CSInterPro:AMP-dep_Synth/Ligncoils:CoilPANTHER:PTHR43272
PANTHER:PTHR43272:SF6PFAM:PF00501ProteinID:CDY51419ProteinID:CDY51419.1ScanProsite:PS00455SEG:seg
SUPFAM:SSF56801UniParc:UPI0002544CC4UniProt:A0A078IPS6MapMan:50.6.2::
Description
BnaA04g26960DBnaA04g26960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPS6]
Coordinates
chrLK032993:+:23739..30900
Molecular Weight (calculated)
74726.2 Da
IEP (calculated)
6.316
GRAVY (calculated)
-0.228
Length
660 amino acids
Sequence
(BLAST)
001: MKSFAAKVED GVRGENGKPS VGPVYRNLLS EKGFPPIDSD ITTAWDIFSK SVKKFPDNKM LGWRRIVDEK VGPYMWKTYK EAYEEVLQIG SALRALGAEP
101: GCRVGIYGVN CPQWIIAMEA CAAHTLICVP LYDTLGSGAV DYIVDHAEID FVFVQETKIK GLLEPDCKCA RRLKAIVSFT NVSEEHNLKA SEVGVKTYSW
201: FDFLQMGCEK PEETTPPKPF NICTIMYTSG TSGDPKGVVL THEAVATYIV GMDLFMDQFE DKMTDEDVYL SFLPLAHILD RMNEEYFFRK GASIGYYHGD
301: LNVLRDDIQE LKPTYLAGVP RVFERIHEGI QKALQELNPR RRFIFNALYK HKLAWLNRGY SHSKASPMAD FIAFRKIRDK LGGRIRLLVS GGAPLSTEIE
401: EFLRVTCCCF VVQGYGLTET LGGTAMGFPD EMCMLGTVGI PAVYNEIRLE EVAEMGYDPL GENPAGEICI RGKCLFSGYY KNPELTQEVM KDGWFHTGDI
501: GEIQSNGVLK IIDRKKNLIK LSQGEYVALE NLENIYGQNS LVQDIWVYGD SFKSMLVAVI VPNQETVKRW AKELGFTKPF EELCSLSEFQ EHIISELKST
601: AEKNKLRKFE YIKAVTVETK PFDVARDLVT ATLKNRRNNL LKYYQVQVDE MYRKLASKKI
Best Arabidopsis Sequence Match ( AT2G47240.3 )
(BLAST)
001: MKSFAAKVEE GVKGIDGKPS VGPVYRNLLS EKGFPPIDSE ITTAWDIFSK SVEKFPDNNM LGWRRIVDEK VGPYMWKTYK EVYEEVLQIG SALRAAGAEP
101: GSRVGIYGVN CPQWIIAMEA CAAHTLICVP LYDTLGSGAV DYIVEHAEID FVFVQDTKIK GLLEPDCKCA KRLKAIVSFT NVSDELSHKA SEIGVKTYSW
201: IDFLHMGREK PEDTNPPKAF NICTIMYTSG TSGDPKGVVL THQAVATFVV GMDLYMDQFE DKMTHDDVYL SFLPLAHILD RMNEEYFFRK GASVGYYHGN
301: LNVLRDDIQE LKPTYLAGVP RVFERIHEGI QKALQELNPR RRFIFNALYK HKLAWLNRGY SHSKASPMAD FIAFRKIRDK LGGRIRLLVS GGAPLSPEIE
401: EFLRVTCCCF VVQGYGLTET LGGTALGFPD EMCMLGTVGI PAVYNEIRLE EVSEMGYDPL GENPAGEICI RGQCMFSGYY KNPELTEEVM KDGWFHTGDI
501: GEILPNGVLK IIDRKKNLIK LSQGEYVALE HLENIFGQNS VVQDIWVYGD SFKSMLVAVV VPNPETVNRW AKDLGFTKPF EELCSFPELK EHIISELKST
601: AEKNKLRKFE YIKAVTVETK PFDVERDLVT ATLKNRRNNL LKYYQVQIDE MYRKLASKKI
Arabidopsis Description
LACS1Long chain acyl-CoA synthetase 1 [Source:UniProtKB/Swiss-Prot;Acc:O22898]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.