CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

nucleus 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027700.1-P	Field mustard	peroxisome	84.27	97.94
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	63.44	91.58
CDY46530	Canola	peroxisome	68.44	83.59
CDY47618	Canola	peroxisome	50.62	72.86
CDY03515	Canola	peroxisome	50.52	72.71
KRH77642	Soybean	endoplasmic reticulum	50.73	72.58
VIT_02s0025g01410.t01	Wine grape	peroxisome	49.79	72.21
KRH27846	Soybean	peroxisome	49.69	71.95
CDX86825	Canola	peroxisome	49.69	71.62
Solyc08g082280.2.1	Tomato	nucleus, plastid	48.96	71.43
GSMUA_Achr3P32060_001	Banana	peroxisome	48.54	71.14
Solyc08g008310.2.1	Tomato	peroxisome	43.96	70.69
GSMUA_Achr6P14370_001	Banana	peroxisome	48.12	70.53
HORVU3Hr1G059140.1	Barley	peroxisome	47.71	69.6
TraesCS3D01G237900.1	Wheat	peroxisome	47.71	69.6
TraesCS3B01G266100.1	Wheat	golgi	47.71	69.6
Zm00001d044016_P001	Maize	mitochondrion	47.4	69.47
TraesCS5B01G147300.1	Wheat	peroxisome	47.71	69.18
KRH60037	Soybean	peroxisome	47.92	69.17
TraesCS5D01G144200.2	Wheat	peroxisome	47.81	68.82
TraesCS5A01G148700.1	Wheat	peroxisome	47.81	68.82
Os01t0681200-01	Rice	plasma membrane	47.5	68.57
KXG27302	Sorghum	cytosol	3.85	68.52
Zm00001d043851_P001	Maize	mitochondrion	46.88	67.77
HORVU5Hr1G046950.26	Barley	peroxisome	48.02	67.69
TraesCS3A01G237700.3	Wheat	peroxisome	47.08	67.36
CDX94232	Canola	peroxisome	46.35	67.32
CDY25270	Canola	peroxisome	46.15	67.22
PGSC0003DMT400014954	Potato	cytosol	8.02	66.38
CDY40856	Canola	peroxisome	49.38	64.67
TraesCS7D01G110700.1	Wheat	peroxisome	43.65	64.46
Os06t0158000-01	Rice	plasma membrane	41.04	64.06
TraesCS7B01G012700.1	Wheat	peroxisome	43.33	64.0
TraesCS7A01G115900.1	Wheat	peroxisome	41.77	63.55
Zm00001d045295_P001	Maize	extracellular	44.58	63.41
Os01t0655800-01	Rice	plasma membrane	44.69	63.09
KRH41306	Soybean	peroxisome	16.77	62.89
KRG94065	Soybean	vacuole	11.35	59.56
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	43.12	57.98
CDY68722	Canola	peroxisome	16.56	55.99
CDX80092	Canola	mitochondrion, peroxisome	16.67	54.61
CDY59237	Canola	peroxisome	37.08	53.45
CDY29350	Canola	peroxisome	36.67	52.85
CDY27501	Canola	peroxisome	34.58	50.3
CDY51419	Canola	peroxisome	34.48	50.15
CDY69216	Canola	peroxisome	21.15	49.27
CDY72011	Canola	peroxisome	10.62	48.34
CDY37793	Canola	peroxisome	21.35	47.56
CDX80093	Canola	peroxisome	21.35	47.56
CDY71490	Canola	extracellular, peroxisome	7.08	44.16
CDX95713	Canola	peroxisome	31.15	43.65
CDX92843	Canola	peroxisome	9.27	41.59
CDY05217	Canola	plastid	26.67	37.26
CDY27725	Canola	plastid	26.35	36.83
CDX74115	Canola	plastid	26.56	36.64
CDY49993	Canola	mitochondrion	26.46	36.49
CDX80638	Canola	peroxisome	25.73	35.34
CDX86151	Canola	peroxisome	25.73	35.34
CDY65251	Canola	peroxisome	7.6	31.2
CDX68052	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	21.98	30.45
CDX79212	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	21.98	30.45
CDY66248	Canola	peroxisome	22.29	29.68
CDY15082	Canola	peroxisome	22.08	29.61
CDY67321	Canola	plastid	15.83	21.17
CDY12731	Canola	plastid	15.42	20.41
CDY53212	Canola	plastid	15.73	20.19
CDY01190	Canola	plastid	15.1	20.17

Protein Annotations

EnsemblPlants:CDY64879	EnsemblPlantsGene:GSBRNA2T00043782001	Gene3D:3.40.50.12780	GO:A0A078JDX7	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9
PFAM:PF00501	ProteinID:CDY64879	ProteinID:CDY64879.1	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
UniParc:UPI0004EE66E0	UniProt:A0A078JDX7	MapMan:50.6.2	:	:	:

Description

BnaAnng19690DBnaAnng19690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDX7]

Coordinates

chrLK034587:-:83..6790

Molecular Weight (calculated)

107791.0 Da

IEP (calculated)

9.354

GRAVY (calculated)

-0.409

Length

960 amino acids

Sequence
(BLAST)

001: MATDRFIVEV EKGKEGVDGG SPSVGSVYRS IYAKDGFPEP ADDLLSCWDI FRASASTPPE HHQRDPRSSE LRSRQASNEP ITRGALQASA LRNQKPAKAN
101: LKETPFPETR AGDGGSEQAS TSRKPPPLNM QAAPSPPVTS RRTRRCSTNR ATVRDNGGTR GRTRRSMTGR RRRSDGKPLR RTKKGLRRGH GRSRADRTPW
201: MLKKELLLSL SAEKSPDNPM LGRREIVDGK AGKYVWQTYK EVYDIVIKLG NSIRTIGVGK GEKCGIYGAN SPEWIISMEA CNAHGLYCVP LYDTLGAGAI
301: EFIICHAEVS LAFSEEKKIS ELLKTAPNST KYLKNIVSFG EVSNVQRAEA ERHGLSIYSW DQFLKLGEGK HYELPEKKRS DICTIMYTSG TTGDPKGVLL
401: TNESIIYLLE GVKKLLKTIN EELTSKDVYL SYLPLAHIFD RVIEELFIYE AASIGFWRGV GYRTLLKTAP NSTKYLKNIV SFGEVSNVQR AEAERHGLSI
501: YSWDQFLKLG EGKHYELPEK KRSDICTIMY TSGTTGDPKG VLLTNESIIY LLEGVKKLLK TINEELTSKD VYLSYLPLAH IFDRVIEELF IYEAASIGFW
601: RGDVKILVED IAALKPTIFC AVPRVLERIY NGLQQKLSDG GFLKKTLFNF AFNYKHNNMV KGKAHEQAAP IFDKIVFKKV KEGLGGRVRL ILSGAAPLAA
701: HIESFLRVVA CAHVLQGYGL TESCGGTFVS IPNELQMLGT VGPPVPNVDI RLESVPEMGY DALASKPRGE ICIRGKTLFS GYYKREDLTQ EVFIDGWLHT
801: GDVGEWQPDG AMKIIDRKKN IFKLSQGEYV AVENLENIYS HVAAIESIWV YGNSYESYLV AVVCPSKIQI EHWAKEHNVS GDFETICQNQ KTKEFILGEF
901: NRVAKDKKLK GFELIKGVHL DTVPFDMERD LITPSYKKKR PQLLKYYQKE IDEMYNKTKN

Best Arabidopsis Sequence Match ( AT1G64400.1 )
(BLAST)

001: MATGRYIVEV EKGKQGVDGG SPSVGPVYRS IYAKDGFPEP PDDLVSAWDI FRLSVEKSPN NPMLGRREIV DGKAGKYVWQ TYKEVHNVVI KLGNSIRTIG
101: VGKGDKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA GAIEFIICHA EVSLAFAEEN KISELLKTAP KSTKYLKYIV SFGEVTNNQR VEAERHRLTI
201: YSWDQFLKLG EGKHYELPEK RRSDVCTIMY TSGTTGDPKG VLLTNESIIH LLEGVKKLLK TIDEELTSKD VYLSYLPLAH IFDRVIEELC IYEAASIGFW
301: RGDVKILIED IAALKPTVFC AVPRVLERIY TGLQQKLSDG GFVKKKLFNF AFKYKHKNME KGQPHEQASP IADKIVFKKV KEGLGGNVRL ILSGAAPLAA
401: HIESFLRVVA CAHVLQGYGL TESCGGTFVS IPNELSMLGT VGPPVPNVDI RLESVPEMGY DALASNPRGE ICIRGKTLFS GYYKREDLTQ EVFIDGWLHT
501: GDVGEWQPDG AMKIIDRKKN IFKLSQGEYV AVENLENIYS HVAAIESIWV YGNSYESYLV AVVCPSKIQI EHWAKEHKVS GDFESICRNQ KTKEFVLGEF
601: NRVAKDKKLK GFELIKGVHL DTVPFDMERD LITPSYKMKR PQLLKYYQKE IDEMYKKNRE VQLRV

Arabidopsis Description

LACS3Long chain acyl-CoA synthetase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7W4]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.