Factsheet for TraesCS5B01G147300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G148700.1	Wheat	peroxisome	98.64	97.9
TraesCS5D01G144200.2	Wheat	peroxisome	98.49	97.75
HORVU5Hr1G046950.26	Barley	peroxisome	97.43	94.71
Os01t0681200-01	Rice	plasma membrane	88.22	87.82
EES01271	Sorghum	peroxisome	86.4	86.4
Zm00001d043851_P001	Maize	mitochondrion	85.5	85.24
GSMUA_Achr3P32060_001	Banana	peroxisome	75.38	76.18
TraesCS3B01G266100.1	Wheat	golgi	72.96	73.4
VIT_02s0025g01410.t01	Wine grape	peroxisome	73.11	73.11
OQU82479	Sorghum	peroxisome	79.46	72.75
KRH27846	Soybean	peroxisome	71.75	71.64
KRH77642	Soybean	endoplasmic reticulum	71.9	70.94
Bra033159.1-P	Field mustard	peroxisome	64.5	70.7
Bra013735.1-P	Field mustard	peroxisome	65.56	69.66
CDX86825	Canola	peroxisome	68.73	68.32
CDY47618	Canola	peroxisome	68.73	68.22
Bra035259.1-P	Field mustard	peroxisome	68.58	68.17
CDY03515	Canola	peroxisome	68.58	68.07
AT4G23850.1	Thale cress	peroxisome	68.43	68.02
KRH60037	Soybean	peroxisome	68.28	67.97
AT4G11030.1	Thale cress	peroxisome	68.13	67.72
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	66.47	66.17
CDX94232	Canola	peroxisome	65.56	65.66
TraesCS7B01G012700.1	Wheat	peroxisome	64.35	65.54
CDY25270	Canola	peroxisome	65.11	65.4
CDY40856	Canola	peroxisome	68.58	61.94
KRG94065	Soybean	vacuole	16.47	59.56
TraesCS5B01G415100.1	Wheat	peroxisome	58.31	58.31
CDY46530	Canola	peroxisome	68.73	57.89
KRH41306	Soybean	peroxisome	21.75	56.25
Bra027700.1-P	Field mustard	peroxisome	69.18	55.45
CDY64879	Canola	peroxisome	69.18	47.71
TraesCS1B01G093600.1	Wheat	peroxisome	48.04	47.46
TraesCS4B01G133700.3	Wheat	peroxisome	39.88	37.93
TraesCS5B01G131800.3	Wheat	peroxisome	39.43	37.18
TraesCS4B01G110600.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	33.38	31.71
TraesCS5B01G118000.1	Wheat	endoplasmic reticulum	32.33	30.66
TraesCS5B01G166400.1	Wheat	golgi	31.57	28.71
TraesCS3B01G570800.1	Wheat	peroxisome	8.46	27.32
TraesCS5B01G536200.1	Wheat	plastid	22.96	20.97
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	22.96	20.13

Protein Annotations

EnsemblPlants:TraesCS5B01G147300.1	EnsemblPlantsGene:TraesCS5B01G147300	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ncoils:Coil	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9
PFAM:PF00501	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	TIGR:cd05927	MapMan:50.6.2

Description

No Description!

Coordinates

chr5B:+:275357408..275363060

Molecular Weight (calculated)

73195.0 Da

IEP (calculated)

6.316

GRAVY (calculated)

-0.198

Length

662 amino acids

Sequence
(BLAST)

001: MKYLVQVAEG REAAPEEGGA PSSGPVYRCA AGAGGASPPA VPGLESCWDI FRLSAEKYPD NPMMGRREIV DGKAGKYTWV TYKEVYDTVI KVGASIRSCG
101: INKGGRCGIY GGNSPEWVVS MQACNAHGIY CVPLYDTLGA GAIEFILCHA EVEIAFVEEK KIGEVLKTLP NATKFLKTIV SFGKVSPDQK EKVEQNGLSI
201: YSWSEFVLKG DGAEEKYELP PKDKADICTI MYTSGTTGDP KGVLISNKSI ITIVSAVDEF LRNSNEQIRE DDVYISYLPL AHIFDRVIEE VFIHHGASIG
301: FWRGDVKLLV EDIGELKPTI FCAVPRVLDR IYGGLQDKVS TGGFLKKTLF NVAYKYKQGN MIKGSKHEDA ASIFDKLVFT KVKRGLGGRV RVILSGAAPL
401: SNHVEEFLRV VTCSHVLQGY GLTETCAGSF VSLPNNMSML GTVGPPVPYV EVRLESVPEM GYDALSKESP RGEICIRGDT LFSGYYKRED LTKEVLVDGW
501: FHTGDIGEWQ HDGSMKIVDR KKNIFKLSQG EYVAVENLEN IFGQAPNVDS IWVYGNSFES CLVAVINPNK QGLERWAESN GVSGDFASIC GDAKAKEFIL
601: EELSKTGKEK KLKGFEMIRA VHLEPVLFDM ERDLITPTYK KKRPQLLKYY QGIIDDMYKS MK

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.