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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • peroxisome 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47618 Canola peroxisome 99.7 99.7
Bra013735.1-P Field mustard peroxisome 92.05 98.56
AT4G23850.1 Thale cress peroxisome 92.65 92.79
CDX86825 Canola peroxisome 80.66 80.78
Solyc08g082280.2.1 Tomato nucleus, plastid 76.61 77.66
CDX94232 Canola peroxisome 76.46 77.16
CDY25270 Canola peroxisome 76.01 76.93
VIT_02s0025g01410.t01 Wine grape peroxisome 76.01 76.59
Solyc08g008310.2.1 Tomato peroxisome 67.77 75.71
KRH27846 Soybean peroxisome 74.06 74.51
KRH77642 Soybean endoplasmic reticulum 74.51 74.07
GSMUA_Achr3P32060_001 Banana peroxisome 71.81 73.13
CDY40856 Canola peroxisome 80.21 72.99
TraesCS3D01G237900.1 Wheat peroxisome 71.66 72.64
TraesCS3B01G266100.1 Wheat golgi 71.66 72.64
HORVU3Hr1G059140.1 Barley peroxisome 71.66 72.64
GSMUA_Achr6P14370_001 Banana peroxisome 71.21 72.52
Zm00001d044016_P001 Maize mitochondrion 70.31 71.6
KRH60037 Soybean peroxisome 71.36 71.58
PGSC0003DMT400014954 Potato cytosol 12.44 71.55
TraesCS3A01G237700.3 Wheat peroxisome 71.06 70.64
KXG27302 Sorghum cytosol 5.7 70.37
TraesCS5B01G147300.1 Wheat peroxisome 68.07 68.58
Zm00001d043851_P001 Maize mitochondrion 68.07 68.37
TraesCS5A01G148700.1 Wheat peroxisome 68.37 68.37
TraesCS5D01G144200.2 Wheat peroxisome 68.22 68.22
Os01t0681200-01 Rice plasma membrane 67.92 68.12
HORVU5Hr1G046950.26 Barley peroxisome 68.22 66.81
Os01t0655800-01 Rice plasma membrane 67.32 66.03
TraesCS7D01G110700.1 Wheat peroxisome 64.32 66.0
TraesCS7B01G012700.1 Wheat peroxisome 63.42 65.08
TraesCS7A01G115900.1 Wheat peroxisome 61.32 64.82
Os06t0158000-01 Rice plasma membrane 59.07 64.06
KRH41306 Soybean peroxisome 24.44 63.67
Zm00001d045295_P001 Maize extracellular 64.02 63.26
CDY46530 Canola peroxisome 72.56 61.58
HORVU7Hr1G024350.1 Barley endoplasmic reticulum, vacuole 63.57 59.38
KRG94065 Soybean vacuole 16.19 59.02
CDY68722 Canola peroxisome 23.09 54.23
CDX80092 Canola mitochondrion, peroxisome 23.39 53.24
CDY59237 Canola peroxisome 52.32 52.4
CDY29350 Canola peroxisome 51.87 51.95
CDY64879 Canola peroxisome 72.71 50.52
CDY51419 Canola peroxisome 48.28 48.79
CDY27501 Canola peroxisome 48.13 48.64
CDY69216 Canola peroxisome 29.98 48.54
CDY72011 Canola peroxisome 15.14 47.87
CDY37793 Canola peroxisome 30.28 46.87
CDX80093 Canola peroxisome 30.28 46.87
CDX95713 Canola peroxisome 44.23 43.07
CDY71490 Canola extracellular, peroxisome 9.75 42.21
CDX92843 Canola peroxisome 12.44 38.78
CDX80638 Canola peroxisome 38.38 36.62
CDX86151 Canola peroxisome 38.38 36.62
CDY05217 Canola plastid 37.48 36.39
CDY27725 Canola plastid 37.33 36.24
CDX74115 Canola plastid 37.48 35.92
CDY49993 Canola mitochondrion 37.33 35.78
CDX68052 Canola endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 31.78 30.59
CDX79212 Canola endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 31.63 30.45
CDY15082 Canola peroxisome 31.78 29.61
CDY66248 Canola peroxisome 31.93 29.54
CDY65251 Canola peroxisome 9.9 28.21
CDY67321 Canola plastid 23.39 21.73
CDY53212 Canola plastid 23.54 20.99
CDY12731 Canola plastid 22.19 20.41
CDY01190 Canola plastid 21.89 20.31
Protein Annotations
Gene3D:3.40.50.12780MapMan:50.6.2InterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigEnsemblPlants:CDY03515ProteinID:CDY03515
ProteinID:CDY03515.1GO:GO:0001676GO:GO:0003674GO:GO:0003824GO:GO:0004467GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016874GO:GO:0102391EnsemblPlantsGene:GSBRNA2T00116198001
PFAM:PF00501ScanProsite:PS00455PANTHER:PTHR43272PANTHER:PTHR43272:SF9GO:Q96538UniProt:Q96538
SUPFAM:SSF56801UniParc:UPI00000AC758SEG:seg:::
Description
BnaC01g15670DAcyl-CoA synthetase [Source:UniProtKB/TrEMBL;Acc:Q96538]
Coordinates
chrLK031943:+:987124..991622
Molecular Weight (calculated)
74469.0 Da
IEP (calculated)
6.264
GRAVY (calculated)
-0.134
Length
667 amino acids
Sequence
(BLAST)
001: MTQQLEKFIF QVEEGREGSD GRPSVGPVYR SVFAKDGFPE PIEGMDSCWD VFRMSVEKYP NNPMLGRREI VDGKPGKYVW QTYQEVYDIV IKLGNSLRSC
101: GVEEQAKCGI YGANSPEWII SMEACNAHGL YCVPLYDTLG AGAVEFIITH SEVSIVFVEE KKISELFKTC PKATEYMKTV VSFGGVTREQ KEAAETFGLV
201: IYAWDEFLKL GEGKQFDLPI KKKSDICTIM YTSGTTGDPK GVMISNESIV TLIAGVIRLL KSANEALTVK DVYLSYLPLA HIFDRVIEEC FIQHGAAIGF
301: WRGDVKLLIE DLGELKPTIF CAVPRVLDRV YSGLQQKLAA GGFFKKFMFD SAFSFKYGHM KKGQSHVEAS PLCDKLVFSK VKQGLGGNVR IILSGAAPLA
401: SHVESFLRVV ACCHVLQGYG LTESCAGTFV SLPDRLDMLG TVGPPVPNVD IRLESVPEME YDALASTPRG EICIRGKTLF SGYYKREDLS KEVLIDGWLH
501: TGDVGEWQPN GSMKIIDRKK NIFKLSQGEY VAVENLENIY GEVQAVDSVW VYGNSFESFL IAVANPNQHI LEKWAAENGV SGDYNALCQN AKAKEFILGE
601: LVKMGKEKKM KGFEIIKAVH LDPVPFDMER DLLTPTYKKK RPQLLKHYQC VIDEMYKTTN ESLASRK
Best Arabidopsis Sequence Match ( AT4G23850.1 )
(BLAST)
001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG
Arabidopsis Description
LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.