CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01190	Canola	plastid	96.41	97.22
AT4G14070.1	Thale cress	plastid	85.79	85.56
CDY67321	Canola	plastid	74.07	74.79
CDY53212	Canola	plastid	76.0	73.66
KRH31560	Soybean	plastid	66.34	66.81
PGSC0003DMT400053079	Potato	cytosol	55.72	65.16
VIT_08s0032g00050.t01	Wine grape	plastid	64.55	64.11
GSMUA_Achr8P08820_001	Banana	peroxisome	33.1	63.83
Solyc09g092450.2.1	Tomato	plastid	63.31	63.49
KRH58837	Soybean	plastid	63.72	63.03
HORVU5Hr1G120850.1	Barley	plastid	57.93	61.31
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	60.41	59.27
KXG37146	Sorghum	plastid	60.14	59.08
Os03t0845500-01	Rice	plastid	61.1	59.07
TraesCS4A01G336500.2	Wheat	mitochondrion, plastid	60.41	58.95
TraesCS4A01G336400.4	Wheat	plastid	58.9	58.17
TraesCS5D01G533700.1	Wheat	plastid	58.62	57.98
TraesCS5B01G536200.1	Wheat	plastid	57.93	57.93
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	60.0	57.62
Zm00001d034832_P006	Maize	plastid	60.14	54.64
HORVU1Hr1G032500.2	Barley	peroxisome	10.62	48.73
GSMUA_Achr8P08810_001	Banana	mitochondrion	13.1	47.98
CDX92843	Canola	peroxisome	8.69	29.44
CDY68722	Canola	peroxisome	10.48	26.76
CDX80092	Canola	mitochondrion, peroxisome	10.76	26.62
CDY69216	Canola	peroxisome	14.9	26.21
CDX80093	Canola	peroxisome	15.03	25.29
CDY37793	Canola	peroxisome	15.03	25.29
CDX80638	Canola	peroxisome	22.76	23.61
CDY59237	Canola	peroxisome	21.66	23.57
CDY29350	Canola	peroxisome	21.66	23.57
CDY49993	Canola	mitochondrion	22.62	23.56
CDX74115	Canola	plastid	22.48	23.42
CDX86151	Canola	peroxisome	22.48	23.32
CDY05217	Canola	plastid	22.07	23.29
CDY27725	Canola	plastid	22.07	23.29
CDY51419	Canola	peroxisome	20.83	22.88
CDY27501	Canola	peroxisome	20.83	22.88
CDX68052	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	21.38	22.37
CDX79212	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	21.38	22.37
CDY47618	Canola	peroxisome	20.55	22.34
CDX86825	Canola	peroxisome	20.41	22.22
CDY03515	Canola	peroxisome	20.41	22.19
CDY15082	Canola	peroxisome	21.38	21.65
CDY66248	Canola	peroxisome	21.38	21.5
CDY65251	Canola	peroxisome	6.48	20.09
CDX95713	Canola	peroxisome	18.9	20.0
CDY40856	Canola	peroxisome	20.0	19.78
CDX94232	Canola	peroxisome	17.93	19.67
CDY25270	Canola	peroxisome	17.66	19.42
CDY46530	Canola	peroxisome	20.14	18.58
CDY64879	Canola	peroxisome	20.41	15.42
CDY71490	Canola	extracellular, peroxisome	3.17	14.94
CDY72011	Canola	peroxisome	4.28	14.69

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	GO:A0A078FHP6	UniProt:A0A078FHP6	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	EnsemblPlants:CDY12731	ProteinID:CDY12731	ProteinID:CDY12731.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00070303001	PFAM:PF00501	ScanProsite:PS00455	PANTHER:PTHR43813
PANTHER:PTHR43813:SF2	SUPFAM:SSF56801	UniParc:UPI0004EF1358	SEG:seg	:	:

Description

BnaC04g29100DBnaC04g29100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHP6]

Coordinates

chrLK032026:-:468233..473355

Molecular Weight (calculated)

80975.0 Da

IEP (calculated)

8.896

GRAVY (calculated)

-0.167

Length

725 amino acids

Sequence
(BLAST)

001: MPLHLKPDCS FFISSSSPLI RASAMTSTSL GPSMLLSYGS SSRDFHDLRF RLISGPRVRV PSFRRFRIHC VSKGKDVTPI IESSSSSGGD AALSYSEWKA
101: VPDIWRSSAE KYGDKIALVD PYHDPPLKLT YNQLEQEILD FAEGLRAVGV KADEKIALFA DNSCRWLVSD QGIMSTGAVN VVRGSRSSVE ELLQIYQHSE
201: SVALVVDNPE FFNRIADTFT SKVSLRFLIL LWGEKSSLVT QGMQIPVYSY TDIKNLGQEK RAGSNDTRKS INPDDTAAIM YTSGTTGNPK GVMLTHRNLL
301: HQIKHLSAYV PAEAGDRFLS MLPSWHAYER ACEYFIFTCG VEQMYTSIRF LKEDLKRYQP HYLISVPLVY ETLYSGIQKQ ISTSSAARKY LALTLIKISL
401: AYMEMKRIYE GMCLTKEQKP PMYIVSLVDW LRARVVAALL WPLHMLAKIL IYKKIHASIG ISKAGISGGG SLPIHIDKFF EAIGVILQNG YGLTETSPVI
501: CARTLSCNVI GSAGYPMHGT EFKIVDPETN TVLPPGSKGI VKVRGPQIMK GYYKNPTTTK QVLNESGWFN TGDMGWIAPH HSTGRSRRCG GLIVLEGRAK
601: DTIVLSTGEN VEPLEIEEAA MRSRLIDQIV VIGQDQRRLG AIIMPNKEEA EKLDPETSQL SSEKLKSLVY QELRKWTSEC SFQVGPVLIV DEPFTIDNGL
701: MTPTMKIRRD KVVAKYKDEI NQLYN

Best Arabidopsis Sequence Match ( AT4G14070.1 )
(BLAST)

001: MQIRLKPDYS FFIASSSTMA STSSLGPSTL LSYGSPSRQF PDFGFRLISG HESVRIPSFR RFRVHCESKE KEVKPSSPFL ESSSFSGDAA LRSSEWKAVP
101: DIWRSSAEKY GDRVALVDPY HDPPLKLTYK QLEQEILDFA EGLRVLGVKA DEKIALFADN SCRWLVSDQG IMATGAVNVV RGSRSSVEEL LQIYRHSESV
201: AIVVDNPEFF NRIAESFTSK ASLRFLILLW GEKSSLVTQG MQIPVYSYAE IINQGQESRA KLSASNDTRS YRNQFIDSDD TAAIMYTSGT TGNPKGVMLT
301: HRNLLHQIKH LSKYVPAQAG DKFLSMLPSW HAYERASEYF IFTCGVEQMY TSIRYLKDDL KRYQPNYIVS VPLVYETLYS GIQKQISASS AGRKFLALTL
401: IKVSMAYMEM KRIYEGMCLT KEQKPPMYIV AFVDWLWARV IAALLWPLHM LAKKLIYKKI HSSIGISKAG ISGGGSLPIH VDKFFEAIGV ILQNGYGLTE
501: TSPVVCARTL SCNVLGSAGH PMHGTEFKIV DPETNNVLPP GSKGIIKVRG PQVMKGYYKN PSTTKQVLNE SGWFNTGDTG WIAPHHSKGR SRHCGGVIVL
601: EGRAKDTIVL STGENVEPLE IEEAAMRSRV IEQIVVIGQD RRRLGAIIIP NKEEAQRVDP ETSKETLKSL VYQELRKWTS ECSFQVGPVL IVDDPFTIDN
701: GLMTPTMKIR RDMVVAKYKE EIDQLYS

Arabidopsis Description

AAE15Long-chain-fatty-acid--[acyl-carrier-protein] ligase AEE15, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8W471]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.