Factsheet for PGSC0003DMT400053079

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g092450.2.1	Tomato	plastid	92.58	79.39
GSMUA_Achr8P08820_001	Banana	peroxisome	38.23	63.03
VIT_08s0032g00050.t01	Wine grape	plastid	72.42	61.51
KRH31560	Soybean	plastid	68.87	59.31
KRH58837	Soybean	plastid	69.52	58.8
Bra032757.1-P	Field mustard	plastid	65.81	56.75
CDY01190	Canola	plastid	65.65	56.61
AT3G23790.1	Thale cress	plastid	65.81	56.51
HORVU5Hr1G120850.1	Barley	plastid	61.77	55.91
AT4G14070.1	Thale cress	plastid	65.48	55.85
CDY12731	Canola	plastid	65.16	55.72
CDY67321	Canola	plastid	64.19	55.43
Bra001919.1-P	Field mustard	plastid	64.19	55.43
CDY53212	Canola	plastid	64.68	53.61
KXG37146	Sorghum	plastid	63.39	53.25
TraesCS4A01G336400.4	Wheat	plastid	62.1	52.45
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	62.42	52.37
TraesCS4A01G336500.2	Wheat	mitochondrion, plastid	62.74	52.36
TraesCS5D01G533700.1	Wheat	plastid	61.77	52.25
TraesCS5B01G536200.1	Wheat	plastid	60.97	52.14
Os03t0845500-01	Rice	plastid	62.58	51.73
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	61.77	50.73
Zm00001d034832_P006	Maize	plastid	63.23	49.12
HORVU1Hr1G032500.2	Barley	peroxisome	12.42	48.73
GSMUA_Achr8P08810_001	Banana	mitochondrion	9.03	28.28
PGSC0003DMT400063438	Potato	peroxisome	3.39	22.83
PGSC0003DMT400023374	Potato	peroxisome	23.39	21.94
PGSC0003DMT400002337	Potato	mitochondrion	22.9	20.4
PGSC0003DMT400000613	Potato	peroxisome	21.45	20.27
PGSC0003DMT400064817	Potato	peroxisome	20.81	19.58
PGSC0003DMT400044860	Potato	peroxisome	21.94	18.73
PGSC0003DMT400000868	Potato	peroxisome	21.61	18.33
PGSC0003DMT400014954	Potato	cytosol	1.13	6.03

Protein Annotations

EnsemblPlants:PGSC0003DMT400053079	EnsemblPlantsGene:PGSC0003DMG400020593	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43813	PANTHER:PTHR43813:SF2
PFAM:PF00501	PGSC:PGSC0003DMG400020593	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	UniParc:UPI000294C4DD
UniProt:M1BUC8	MapMan:35.1	:	:	:	:

Description

Acyl-CoA synthetase [Source:PGSC_GENE;Acc:PGSC0003DMG400020593]

Coordinates

chr9:-:59744268..59752991

Molecular Weight (calculated)

68565.9 Da

IEP (calculated)

7.647

GRAVY (calculated)

-0.057

Length

620 amino acids

Sequence
(BLAST)

001: MTYKQLDQEI VDFSEGLRVI GLKPHEKIAL FADNSCRWLV ADQGMMASGA INVVRGSRSS DQELLQLYSH SESVALAIDN PEMYNRIADT FGSHAAVRFV
101: ILLWGEKSSL VTDARQGYPV YTYKEIIELG HKSRVDLLDS EDASKTFTFQ IPIGRISVAN KFVLGKQYSY EAINSDDVAT LVYTSGTTGN PKGVMLTHKN
201: LLHQILNLWE IVPAVPGDRF LSMLPPWHAY ERACEYFIFT HGTEQVYTTV KNLKIIIDYE LYSGILKQIN SNSAARKLIA QLFLRISMAY MEAKRIYEGK
301: CLTKDMKQPS YIVSLLDWLW ARTIAAILLP LHMLAKKIVY SKIHSGIGIS KAGISGGGSL SSHVDKFFEA IDIKIQNGYG LTESAPVIAA RSLTCNVLGS
401: IGRPIRHVEV KVVNSETDEV LPPGSKGTVK ARGPLIMKGY YKNPVATKQA IDENGWLNTG DLGWIVPDHS IGRSRNCGGA IVLEGRAKDT IVLSTGENVE
501: PSEIEEAAMG SSLIQQIVVI GQDQRRLGAI IVPNKEEVLL AAKRSAVVDS ETTEVSKEKT VGLLHDELRK WTSGCSFQVG PILLVDQPFT IDSGLLTPTM
601: KIKRDRVAAL YKEQIDNLYI

Best Arabidopsis Sequence Match ( AT3G23790.1 )
(BLAST)

001: MASTSLGASI LVSHCSSAPE FQVSGMRLVF GYKAFGCRTS RRGFRVRCES KIQEKELRRC SPFLERLSLP REAALSSNEW KSVPDIWRSS VEKYGDRVAV
101: VDPYHDPPST FTYRQLEQEI LDFVEGLRVV GVKADEKIAL FADNSCRWLV ADQGIMATGA VNVVRGSRSS VEELLQIYCH SESVALVVDN PEFFNRIAES
201: FSYKAAPKFV ILLWGEKSSL VTAGRHTPVY SYNEIKKFGQ ERRAKFARSN DSGKYEYEYI DPDDIATIMY TSGTTGNPKG VMLTHQNLLH QIRNLSDFVP
301: AEAGERFLSM LPSWHAYERA CEYFIFTCGV EQKYTSIRFL KDDLKRYQPH YLISVPLVYE TLYSGIQKQI SASSPARKFL ALTLIKVSLA YTEMKRVYEG
401: LCLTKNQKPP MYIVSLVDWL WARVVAFFLW PLHMLAEKLV HRKIRSSIGI TKAGVSGGGS LPMHVDKFFE AIGVNVQNGY GLTETSPVVS ARRLRCNVLG
501: SVGHPIKDTE FKIVDHETGT VLPPGSKGIV KVRGPPVMKG YYKNPLATKQ VIDDDGWFNT GDMGWITPQH STGRSRSCGG VIVLEGRAKD TIVLSTGENV
601: EPLEIEEAAM RSNLIQQIVV IGQDQRRLGA IVIPNKEAAE GAAKQKISPV DSEVNELSKE TITSMVYEEL RKWTSQCSFQ VGPVLIVDEP FTIDNGLMTP
701: TMKIRRDKVV DQYKNEIERL YK

Arabidopsis Description

AAE16Probable acyl-activating enzyme 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.