Factsheet for TraesCS4A01G336500.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	97.04	97.56
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	96.64	95.1
TraesCS4A01G336400.4	Wheat	plastid	85.46	86.51
Os03t0845500-01	Rice	plastid	79.41	78.67
KXG37146	Sorghum	plastid	76.99	77.51
Zm00001d034832_P006	Maize	plastid	77.52	72.18
GSMUA_Achr8P08820_001	Banana	peroxisome	35.13	69.41
VIT_08s0032g00050.t01	Wine grape	plastid	63.26	64.38
PGSC0003DMT400053079	Potato	cytosol	52.36	62.74
AT3G23790.1	Thale cress	plastid	60.16	61.91
Bra032757.1-P	Field mustard	plastid	59.35	61.34
CDY01190	Canola	plastid	59.22	61.2
Bra001919.1-P	Field mustard	plastid	58.95	61.0
KRH31560	Soybean	plastid	58.95	60.83
CDY67321	Canola	plastid	58.68	60.72
KRH58837	Soybean	plastid	59.76	60.57
CDY12731	Canola	plastid	58.95	60.41
AT4G14070.1	Thale cress	plastid	58.82	60.11
Solyc09g092450.2.1	Tomato	plastid	58.41	60.03
CDY53212	Canola	plastid	59.89	59.49
GSMUA_Achr8P08810_001	Banana	mitochondrion	14.54	54.55
TraesCS7A01G115900.1	Wheat	peroxisome	21.4	25.2
TraesCS1A01G075000.1	Wheat	golgi	22.21	24.63
TraesCS5A01G133200.2	Wheat	peroxisome	21.8	23.08
TraesCS5A01G148700.1	Wheat	peroxisome	20.59	22.94
TraesCS3A01G237700.3	Wheat	peroxisome	20.59	22.8
TraesCS4A01G207000.1	Wheat	golgi	21.4	22.71
TraesCS4A01G184900.2	Wheat	peroxisome	21.27	22.7
TraesCS5A01G411500.2	Wheat	golgi	20.19	22.59
TraesCS5A01G169600.1	Wheat	golgi	21.13	21.57
TraesCS5A01G117700.1	Wheat	endoplasmic reticulum, vacuole	20.05	21.35

Protein Annotations

EnsemblPlants:TraesCS4A01G336500.2	EnsemblPlantsGene:TraesCS4A01G336500	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43813	PANTHER:PTHR43813:SF2	PFAM:PF00501
SEG:seg	SUPFAM:SSF56801	TIGR:cd05907	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4A:-:618660637..618674099

Molecular Weight (calculated)

81537.6 Da

IEP (calculated)

8.868

GRAVY (calculated)

-0.098

Length

743 amino acids

Sequence
(BLAST)

001: MLLASSGQMA ALRPPRLLLL PPRPAALPLR RRPSMGASSA RRRGGAGRVC VPRCTGATTP PQTSAGGSAV QVPARRKCSP LLDSALLPGG SELAVHEWKA
101: VPDIWRTAAE KYADRVALRD PYHDPPSELT YKQLEQQILD FSHGLRVVGG APDEKIALFA DNSCRWLVAD QGIMATGAIN VVRGTKSSDE ELFQIYSHSE
201: SIALVVDSPQ FFNRLAESFI SRINARFVVL LWGDKSSLNS KAVMDIPVYD YNDITELGRE NRNALCYSSE LSEQGQQGVF EAIGPEDVAT LIYTSGTGGT
301: PKGVMLTHRN LLHQINNLWE IVPAVPGDRF LSMLPPWHAY ERSTEYFIFT HGIQQVYTTV KHLKADLQHH QPHYIISVPL VYETLYSSIQ RQISASSPAR
401: ETVALALIKI SLLFMEAKKI YEGTVLSNSP VKPSFIFYMF NYLRARIVAA LLWPLHNLAK MLVYKKIHSS IGISKAGISG GGSLPMHVDK FFEAIGIKVQ
501: NGYGLTETSP VVAARRPFCN VLGTVGHPIK HTEIKIVDIE TGEVLPDGSK GIVKIKGLPV MKGYYKNPSA TNKALDLEGW FNTGDIGWIA PHHATGPSRK
601: CGGMLVLEGR AKDTIVLTTG ENVEPAELEE AASRSSLIDQ IMVIGQDRRR LGAIIVPNND EVVAAAKRKY SLDGNNGLAK DTVMSLLYAE LKTWMAGCSF
701: QIGPILVVDE PFTIDNGLMT PTMKIRRDKV AAKYQSEIEA LYN

Best Arabidopsis Sequence Match ( AT3G23790.1 )
(BLAST)

001: MASTSLGASI LVSHCSSAPE FQVSGMRLVF GYKAFGCRTS RRGFRVRCES KIQEKELRRC SPFLERLSLP REAALSSNEW KSVPDIWRSS VEKYGDRVAV
101: VDPYHDPPST FTYRQLEQEI LDFVEGLRVV GVKADEKIAL FADNSCRWLV ADQGIMATGA VNVVRGSRSS VEELLQIYCH SESVALVVDN PEFFNRIAES
201: FSYKAAPKFV ILLWGEKSSL VTAGRHTPVY SYNEIKKFGQ ERRAKFARSN DSGKYEYEYI DPDDIATIMY TSGTTGNPKG VMLTHQNLLH QIRNLSDFVP
301: AEAGERFLSM LPSWHAYERA CEYFIFTCGV EQKYTSIRFL KDDLKRYQPH YLISVPLVYE TLYSGIQKQI SASSPARKFL ALTLIKVSLA YTEMKRVYEG
401: LCLTKNQKPP MYIVSLVDWL WARVVAFFLW PLHMLAEKLV HRKIRSSIGI TKAGVSGGGS LPMHVDKFFE AIGVNVQNGY GLTETSPVVS ARRLRCNVLG
501: SVGHPIKDTE FKIVDHETGT VLPPGSKGIV KVRGPPVMKG YYKNPLATKQ VIDDDGWFNT GDMGWITPQH STGRSRSCGG VIVLEGRAKD TIVLSTGENV
601: EPLEIEEAAM RSNLIQQIVV IGQDQRRLGA IVIPNKEAAE GAAKQKISPV DSEVNELSKE TITSMVYEEL RKWTSQCSFQ VGPVLIVDEP FTIDNGLMTP
701: TMKIRRDKVV DQYKNEIERL YK

Arabidopsis Description

AAE16Probable acyl-activating enzyme 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.