CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58837	Soybean	plastid	79.72	78.31
VIT_08s0032g00050.t01	Wine grape	plastid	72.08	71.1
PGSC0003DMT400053079	Potato	cytosol	59.31	68.87
Solyc09g092450.2.1	Tomato	plastid	67.5	67.22
AT3G23790.1	Thale cress	plastid	67.36	67.17
CDY01190	Canola	plastid	66.67	66.76
Bra032757.1-P	Field mustard	plastid	66.53	66.62
CDY12731	Canola	plastid	66.81	66.34
GSMUA_Achr8P08820_001	Banana	peroxisome	34.44	65.96
AT4G14070.1	Thale cress	plastid	66.25	65.61
Bra001919.1-P	Field mustard	plastid	65.14	65.32
CDY67321	Canola	plastid	64.86	65.04
CDY53212	Canola	plastid	66.11	63.64
HORVU5Hr1G120850.1	Barley	plastid	59.03	62.04
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	61.67	60.08
KXG37146	Sorghum	plastid	61.25	59.76
Os03t0845500-01	Rice	plastid	62.22	59.73
TraesCS5B01G536200.1	Wheat	plastid	59.72	59.31
TraesCS4A01G336500.2	Wheat	mitochondrion, plastid	60.83	58.95
TraesCS5D01G533700.1	Wheat	plastid	60.0	58.94
TraesCS4A01G336400.4	Wheat	plastid	60.0	58.86
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	60.83	58.01
Zm00001d034832_P006	Maize	plastid	61.11	55.14
HORVU1Hr1G032500.2	Barley	peroxisome	11.11	50.63
GSMUA_Achr8P08810_001	Banana	mitochondrion	13.75	50.0
KRH48841	Soybean	peroxisome	8.33	27.4
KRG96554	Soybean	peroxisome	22.78	24.77
KRH68292	Soybean	endoplasmic reticulum	22.78	24.77
KRH31765	Soybean	peroxisome	22.64	24.7
KRH69184	Soybean	peroxisome	22.5	24.55
KRH29538	Soybean	peroxisome	22.36	24.54
KRG89197	Soybean	peroxisome	22.36	24.39
KRH24533	Soybean	peroxisome	22.22	24.39
KRH60037	Soybean	peroxisome	22.5	24.36
KRH27846	Soybean	peroxisome	22.36	24.28
KRH49531	Soybean	peroxisome	22.22	24.24
KRH57847	Soybean	cytosol	2.92	23.86
KRH77642	Soybean	endoplasmic reticulum	22.22	23.84
KRH26020	Soybean	cytosol	2.92	23.6
KRH18736	Soybean	peroxisome, plastid	22.64	23.42
KRG89997	Soybean	endoplasmic reticulum	21.81	23.29
KRG91264	Soybean	peroxisome	22.5	23.21
KRH53234	Soybean	mitochondrion	22.36	23.2
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	22.08	22.84
KRG94065	Soybean	vacuole	5.69	22.4
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	22.36	22.21
KRH16338	Soybean	plastid, vacuole	19.72	21.95
KRH17725	Soybean	peroxisome	21.81	21.66
KRH66241	Soybean	peroxisome	10.28	21.02
KRH41306	Soybean	peroxisome	6.94	19.53
KRH13185	Soybean	cytosol	13.19	15.2

Protein Annotations

EMBL:ACUP02007146	EnsemblPlants:KRH31560	EnsemblPlantsGene:GLYMA_11G254100	EntrezGene:100782583	Gene3D:3.30.300.30	Gene3D:3.40.50.12780
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR43813	PANTHER:PTHR43813:SF2	PFAM:PF00501	ProteinID:KRH31560	ProteinID:KRH31560.1	ScanProsite:PS00455
SEG:seg	SUPFAM:SSF56801	UniParc:UPI000233D11A	UniProt:K7LRX9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr11:+:34463344..34474704

Molecular Weight (calculated)

80243.3 Da

IEP (calculated)

7.684

GRAVY (calculated)

-0.148

Length

720 amino acids

Sequence
(BLAST)

001: MSAIPISSSY ASTFSYSAAH ALPFFFARNN YSTRINLHPP VFCQLQSETE KPLTRRCSPF LESSLLSGNG GVASNEWKAV PDIWRSSAEK YGDKIALVDP
101: YHDPPSTMTY KQLEDAILDF AEGLRVIGVR PNEKLALFAD NSCRWLVADQ GMMACGAINV VRGSRSSIEE LLQIYNHSES VALAVDNPEM LNRIAKLFYL
201: KASMRFIILL WGEKSGLVSE GDKEVPVFTF TEVIHLGQES RRVLFDSLDT RKHYMYEAIK SDDIATLVYT SGTTGNPKGV MLTHQNLLHQ IKNLGDIVPA
301: EVGDRFLSML PSWHAYERAC EYFIFSCGVE QVYTTVRNLK EDLGHYQPHY LISVPLVYET LYSGIQKQIS TSSLVRKLVA LTFIRVSLRY MECKRIYEGK
401: CLTKDQKPPS YLHSILDWLW ARVVATILFP VHLLAKILVY HKIHSAIGIS KAGVSGGGSL SSHVDRFFEA IGVNVQNGYG LTETSPVIAA RRLSYNVIGS
501: VGHPIKHTEF KVVDSETDEV LPPGSKGILK VRGPQLMKGY YKNPSATNQV LDRDGWLNTG DIGWIVPHHS TGRSRNSSGV IVVDGRAKDT IVLSTGENVE
601: PGELEEAAMR SSLIHQIVVI GQDKRRLGAV IVPNKEEVLK AARESSIIDS NSSDASQEKV TSLIYKELRT WTSESPFQIG PVLLVNDPFT IDNGLMTPTM
701: KIRRDKVVAQ YGDQIENLYK

Best Arabidopsis Sequence Match ( AT3G23790.1 )
(BLAST)

001: MASTSLGASI LVSHCSSAPE FQVSGMRLVF GYKAFGCRTS RRGFRVRCES KIQEKELRRC SPFLERLSLP REAALSSNEW KSVPDIWRSS VEKYGDRVAV
101: VDPYHDPPST FTYRQLEQEI LDFVEGLRVV GVKADEKIAL FADNSCRWLV ADQGIMATGA VNVVRGSRSS VEELLQIYCH SESVALVVDN PEFFNRIAES
201: FSYKAAPKFV ILLWGEKSSL VTAGRHTPVY SYNEIKKFGQ ERRAKFARSN DSGKYEYEYI DPDDIATIMY TSGTTGNPKG VMLTHQNLLH QIRNLSDFVP
301: AEAGERFLSM LPSWHAYERA CEYFIFTCGV EQKYTSIRFL KDDLKRYQPH YLISVPLVYE TLYSGIQKQI SASSPARKFL ALTLIKVSLA YTEMKRVYEG
401: LCLTKNQKPP MYIVSLVDWL WARVVAFFLW PLHMLAEKLV HRKIRSSIGI TKAGVSGGGS LPMHVDKFFE AIGVNVQNGY GLTETSPVVS ARRLRCNVLG
501: SVGHPIKDTE FKIVDHETGT VLPPGSKGIV KVRGPPVMKG YYKNPLATKQ VIDDDGWFNT GDMGWITPQH STGRSRSCGG VIVLEGRAKD TIVLSTGENV
601: EPLEIEEAAM RSNLIQQIVV IGQDQRRLGA IVIPNKEAAE GAAKQKISPV DSEVNELSKE TITSMVYEEL RKWTSQCSFQ VGPVLIVDEP FTIDNGLMTP
701: TMKIRRDKVV DQYKNEIERL YK

Arabidopsis Description

AAE16Probable acyl-activating enzyme 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.