Factsheet for Os03t0845500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 2

Predictors

GFP

MS/MS

Papers

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	78.93	80.11
KXG37146	Sorghum	plastid	78.8	80.08
HORVU5Hr1G120850.1	Barley	plastid	72.93	79.85
TraesCS4A01G336500.2	Wheat	mitochondrion, plastid	78.67	79.41
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	78.8	78.28
TraesCS5B01G536200.1	Wheat	plastid	75.07	77.66
TraesCS4A01G336400.4	Wheat	plastid	75.73	77.38
TraesCS5D01G533700.1	Wheat	plastid	74.8	76.53
Zm00001d034832_P006	Maize	plastid	79.33	74.56
GSMUA_Achr8P08820_001	Banana	peroxisome	34.93	69.68
HORVU1Hr1G032500.2	Barley	peroxisome	14.27	67.72
VIT_08s0032g00050.t01	Wine grape	plastid	63.07	64.79
PGSC0003DMT400053079	Potato	cytosol	51.73	62.58
KRH58837	Soybean	plastid	61.07	62.48
KRH31560	Soybean	plastid	59.73	62.22
Bra032757.1-P	Field mustard	plastid	59.6	62.17
CDY01190	Canola	plastid	59.47	62.03
AT3G23790.1	Thale cress	plastid	59.2	61.5
AT4G14070.1	Thale cress	plastid	59.47	61.35
Solyc09g092450.2.1	Tomato	plastid	58.93	61.13
CDY12731	Canola	plastid	59.07	61.1
Bra001919.1-P	Field mustard	plastid	57.87	60.45
CDY67321	Canola	plastid	57.47	60.03
CDY53212	Canola	plastid	58.27	58.42
GSMUA_Achr8P08810_001	Banana	mitochondrion	15.2	57.58
Os11t0169800-01	Rice	plastid	12.8	26.45
Os11t0558300-01	Rice	peroxisome	21.87	24.81
Os05t0132100-02	Rice	plasma membrane	21.73	24.36
Os01t0681200-01	Rice	plasma membrane	21.2	23.91
Os12t0143900-01	Rice	peroxisome	22.4	23.76
Os11t0147000-01	Rice	peroxisome	22.27	23.55
Os06t0158000-01	Rice	plasma membrane	18.93	23.09
Os12t0168700-01	Rice	vacuole	21.2	22.78
Os05t0317200-01	Rice	plastid	21.87	22.59
Os01t0655800-01	Rice	plasma membrane	19.73	21.76

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	EntrezGene:4334764	ProteinID:AAS07378.1	ProteinID:ABF99868.1
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ProteinID:BAF13792.1	ProteinID:BAS87340.1	ProteinID:EEE60290.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:Os03g0845500	EnsemblPlants:Os03t0845500-01	PFAM:PF00501
ScanProsite:PS00455	PANTHER:PTHR43813	PANTHER:PTHR43813:SF2	UniProt:Q75LB3	SUPFAM:SSF56801	UniParc:UPI0000239494
RefSeq:XP_015627817.1	SEG:seg	:	:	:	:

Description

Similar to Acyl-CoA synthetase-like protein. (Os03t0845500-01)

Coordinates

chr3:-:35549181..35558048

Molecular Weight (calculated)

83215.7 Da

IEP (calculated)

8.894

GRAVY (calculated)

-0.107

Length

750 amino acids

Sequence
(BLAST)

001: MLASSASGQM AALCSPSPTL PTASLLLLRR RRLRLLHPPP SAAALLLLLP ARRRGRHHHR RGGVLRCDAA AASPSAGSTL ENPVRRKCSP LLESALLPGG
101: NGLTTHDWMA VPDIWRTAAE KYADRVALVD PYHEPPSELT YKQLEQEILD FSQGLRAIGV APDEKIALFA DNSCRWLVAD QGIMATGAIN VVRGTRSSDE
201: ELFQIYTHSE SIALVVDSPQ FFNRLAESFI SRINARFIVL LWGEKSCLNS EVVNGIPLYD FKDITQLGRE SRNTLRHSHE QGQQVVFETI TPDDVATLIY
301: TSGTSGTPKG VMLTHRNLLH QIKNLWDFVP AVPGDRFLSM LPPWHAYERA SEYFIFTYGI QQVYTTVKYL KEDLQRYQPQ YIVSVPLVYE ILYSSIQRQI
401: SSSSTARKFV ALALIKISLL YMEAKRIYEG TVLSNNPVKP SFIVYMVNWL SARIVAALLW PLHNLAKTLV YKKIHSAIGI SKAGISGGGS LPMHVDKFFE
501: AIGVKVQNGY GLTETSPVVA ARRPFCNVLG TVGHPVKHTE IKVVDMETGE VLPDGSKGVV KVRGPQVMKG YYKNPSATNK VLDQEGWFDT GDIGWIAPHC
601: PTGPSRKCGG MLVLEGRAKD TIVLTTGENV EPAEIEEAAS RSDLINQIVV VGQDKRRIGA LIVPNYDEVL ATAKRKSILD GNNELAKDKV LNLLYDELRT
701: WMVDCSFQIG PILIVDEPFT VDNGLLTPTL KLRRDKVTAK YHREIDALYK

Best Arabidopsis Sequence Match ( AT3G23790.1 )
(BLAST)

001: MASTSLGASI LVSHCSSAPE FQVSGMRLVF GYKAFGCRTS RRGFRVRCES KIQEKELRRC SPFLERLSLP REAALSSNEW KSVPDIWRSS VEKYGDRVAV
101: VDPYHDPPST FTYRQLEQEI LDFVEGLRVV GVKADEKIAL FADNSCRWLV ADQGIMATGA VNVVRGSRSS VEELLQIYCH SESVALVVDN PEFFNRIAES
201: FSYKAAPKFV ILLWGEKSSL VTAGRHTPVY SYNEIKKFGQ ERRAKFARSN DSGKYEYEYI DPDDIATIMY TSGTTGNPKG VMLTHQNLLH QIRNLSDFVP
301: AEAGERFLSM LPSWHAYERA CEYFIFTCGV EQKYTSIRFL KDDLKRYQPH YLISVPLVYE TLYSGIQKQI SASSPARKFL ALTLIKVSLA YTEMKRVYEG
401: LCLTKNQKPP MYIVSLVDWL WARVVAFFLW PLHMLAEKLV HRKIRSSIGI TKAGVSGGGS LPMHVDKFFE AIGVNVQNGY GLTETSPVVS ARRLRCNVLG
501: SVGHPIKDTE FKIVDHETGT VLPPGSKGIV KVRGPPVMKG YYKNPLATKQ VIDDDGWFNT GDMGWITPQH STGRSRSCGG VIVLEGRAKD TIVLSTGENV
601: EPLEIEEAAM RSNLIQQIVV IGQDQRRLGA IVIPNKEAAE GAAKQKISPV DSEVNELSKE TITSMVYEEL RKWTSQCSFQ VGPVLIVDEP FTIDNGLMTP
701: TMKIRRDKVV DQYKNEIERL YK

Arabidopsis Description

AAE16Probable acyl-activating enzyme 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.