Factsheet for VIT_08s0032g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053079	Potato	cytosol	61.51	72.42
KRH31560	Soybean	plastid	71.1	72.08
KRH58837	Soybean	plastid	71.78	71.49
Solyc09g092450.2.1	Tomato	plastid	69.73	70.4
GSMUA_Achr8P08820_001	Banana	peroxisome	36.16	70.21
AT3G23790.1	Thale cress	plastid	66.58	67.31
Bra001919.1-P	Field mustard	plastid	65.21	66.3
HORVU5Hr1G120850.1	Barley	plastid	61.92	65.99
Bra032757.1-P	Field mustard	plastid	64.93	65.92
CDY67321	Canola	plastid	64.79	65.88
CDY01190	Canola	plastid	64.79	65.79
AT4G14070.1	Thale cress	plastid	64.66	64.92
CDY12731	Canola	plastid	64.11	64.55
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	64.93	64.14
CDY53212	Canola	plastid	65.48	63.9
TraesCS4A01G336500.2	Wheat	mitochondrion, plastid	64.38	63.26
Os03t0845500-01	Rice	plastid	64.79	63.07
TraesCS5B01G536200.1	Wheat	plastid	62.19	62.62
TraesCS5D01G533700.1	Wheat	plastid	62.88	62.62
TraesCS4A01G336400.4	Wheat	plastid	62.88	62.53
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	64.38	62.25
KXG37146	Sorghum	plastid	62.74	62.06
Zm00001d034832_P006	Maize	plastid	63.42	58.02
HORVU1Hr1G032500.2	Barley	peroxisome	11.37	52.53
GSMUA_Achr8P08810_001	Banana	mitochondrion	14.25	52.53
VIT_14s0128g00720.t01	Wine grape	peroxisome	22.05	25.43
VIT_05s0020g03080.t01	Wine grape	peroxisome	23.15	24.25
VIT_02s0025g01410.t01	Wine grape	peroxisome	21.51	23.72
VIT_07s0005g01790.t01	Wine grape	peroxisome	21.51	23.72
VIT_18s0001g02810.t01	Wine grape	vacuole	22.47	23.53
VIT_03s0063g01880.t01	Wine grape	peroxisome	20.82	23.07
VIT_12s0057g01270.t01	Wine grape	peroxisome	22.05	22.39

Protein Annotations

EntrezGene:100247941	wikigene:100247941	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:35.1	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	ProteinID:CBI39044	ProteinID:CBI39044.3	UniProt:D7U8I0	EMBL:FN596742	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	EntrezGene:LOC100247941	wikigene:LOC100247941	PFAM:PF00501
ScanProsite:PS00455	PANTHER:PTHR43813	PANTHER:PTHR43813:SF2	SUPFAM:SSF56801	UniParc:UPI00015CA4E3	ArrayExpress:VIT_08s0032g00050
EnsemblPlantsGene:VIT_08s0032g00050	EnsemblPlants:VIT_08s0032g00050.t01	unigene:Vvi.24987	RefSeq:XP_002263501	RefSeq:XP_002263501.1	RefSeq:XP_010653199.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr8:+:2920819..2982931

Molecular Weight (calculated)

82100.2 Da

IEP (calculated)

8.082

GRAVY (calculated)

-0.124

Length

730 amino acids

Sequence
(BLAST)

001: MSPSLTLSPS PAPKMAFISS PPLQFQLTTL TITTPLLHTK SLRRLPRAFR FRVFSQSMTE ERQIRKFSPF LEREFLLGDG VLASDEWKAV PDIWRSSAER
101: YGDRVALVDP YHDPPSNMTY KQLEQEILDF SEGLRAIGVK PDEKLALFAD NSCRWLIADQ GIMAIGAINV VRGSRSSVEE LLQIYIHSES VALAVDNPEL
201: FGRIAETFCS RAAIRFVVLL WGEKSCLPSE VMDRVPVFNY KEIIDLGREC RSVFLDSHYA RKNYIYEAIS SNDIATLVYT SGTTGNPKGV MLTHQNLLHQ
301: IKNLWDIVPA EPGDRFLSML PSWHAYERAS EYFIFTHGIE QVYTTVPNLK EDLRRYQPQY LISVPLVYET LYSGIQKQIS TSSTVRKLVA LTFIRISLAY
401: MELKRIYEGK FLQKSQKQYS YIASIFDWLW AKIIAAILWP VHMLGKKLVY SKIHSAIGIS KAGVSGGGSL PSHVDRFFEA IDIKVQNGYG LTECSPVTAA
501: RRPTCNVLGS VGHPIRHTEI KIVDSETDEL LPPGSKGIVK VKGPHVMKGY YKNELATKKV LDEDGWLNTG DIGWIAPHHS VGRSRHCGGV IVLEGRAKDT
601: IVLSTGENVE PTELEEAAMR STLIQQIVVI GQDQRRLGAI IVPNKEEVLA AAKRLSILNA NTSELSKEKI TGLLHEEIRT WTEGFSFQIG PILVVDEPFT
701: IDSGLMTPTM KIRRDRVAAL YQEQIAHLYN

Best Arabidopsis Sequence Match ( AT3G23790.1 )
(BLAST)

001: MASTSLGASI LVSHCSSAPE FQVSGMRLVF GYKAFGCRTS RRGFRVRCES KIQEKELRRC SPFLERLSLP REAALSSNEW KSVPDIWRSS VEKYGDRVAV
101: VDPYHDPPST FTYRQLEQEI LDFVEGLRVV GVKADEKIAL FADNSCRWLV ADQGIMATGA VNVVRGSRSS VEELLQIYCH SESVALVVDN PEFFNRIAES
201: FSYKAAPKFV ILLWGEKSSL VTAGRHTPVY SYNEIKKFGQ ERRAKFARSN DSGKYEYEYI DPDDIATIMY TSGTTGNPKG VMLTHQNLLH QIRNLSDFVP
301: AEAGERFLSM LPSWHAYERA CEYFIFTCGV EQKYTSIRFL KDDLKRYQPH YLISVPLVYE TLYSGIQKQI SASSPARKFL ALTLIKVSLA YTEMKRVYEG
401: LCLTKNQKPP MYIVSLVDWL WARVVAFFLW PLHMLAEKLV HRKIRSSIGI TKAGVSGGGS LPMHVDKFFE AIGVNVQNGY GLTETSPVVS ARRLRCNVLG
501: SVGHPIKDTE FKIVDHETGT VLPPGSKGIV KVRGPPVMKG YYKNPLATKQ VIDDDGWFNT GDMGWITPQH STGRSRSCGG VIVLEGRAKD TIVLSTGENV
601: EPLEIEEAAM RSNLIQQIVV IGQDQRRLGA IVIPNKEAAE GAAKQKISPV DSEVNELSKE TITSMVYEEL RKWTSQCSFQ VGPVLIVDEP FTIDNGLMTP
701: TMKIRRDKVV DQYKNEIERL YK

Arabidopsis Description

AAE16Probable acyl-activating enzyme 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.