Factsheet for TraesCS5D01G533700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G336400.4	Wheat	plastid	96.04	95.91
TraesCS5B01G536200.1	Wheat	plastid	93.59	94.62
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	85.4	84.71
HORVU1Hr1G032500.2	Barley	peroxisome	16.51	76.58
Os03t0845500-01	Rice	plastid	76.53	74.8
KXG37146	Sorghum	plastid	74.35	73.85
Zm00001d034832_P006	Maize	plastid	75.31	69.17
GSMUA_Achr8P08820_001	Banana	peroxisome	34.52	67.29
VIT_08s0032g00050.t01	Wine grape	plastid	62.62	62.88
PGSC0003DMT400053079	Potato	cytosol	52.25	61.77
AT3G23790.1	Thale cress	plastid	59.75	60.66
Bra001919.1-P	Field mustard	plastid	59.21	60.45
CDY67321	Canola	plastid	58.94	60.17
KRH31560	Soybean	plastid	58.94	60.0
Bra032757.1-P	Field mustard	plastid	58.8	59.94
CDY01190	Canola	plastid	58.66	59.81
KRH58837	Soybean	plastid	59.62	59.62
Solyc09g092450.2.1	Tomato	plastid	58.39	59.2
AT4G14070.1	Thale cress	plastid	58.25	58.73
CDY12731	Canola	plastid	57.98	58.62
CDY53212	Canola	plastid	59.07	57.89
GSMUA_Achr8P08810_001	Banana	mitochondrion	14.05	52.02
TraesCS1D01G077600.1	Wheat	golgi	22.78	24.93
TraesCS7D01G110700.1	Wheat	peroxisome	21.83	24.62
TraesCS5D01G420300.1	Wheat	golgi	20.87	23.11
TraesCS3D01G237900.1	Wheat	peroxisome	20.6	22.95
TraesCS4D01G108300.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	21.69	22.81
TraesCS5D01G144200.2	Wheat	peroxisome	20.33	22.34
TraesCS5D01G141300.1	Wheat	peroxisome	21.28	22.22
TraesCS4D01G128700.3	Wheat	mitochondrion	20.87	21.98
TraesCS5D01G129800.1	Wheat	golgi	20.19	21.2
TraesCS5D01G174000.1	Wheat	peroxisome	20.87	21.02

Protein Annotations

EnsemblPlants:TraesCS5D01G533700.1	EnsemblPlantsGene:TraesCS5D01G533700	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43813	PANTHER:PTHR43813:SF2
PFAM:PF00501	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	TIGR:cd05907	MapMan:35.1

Description

No Description!

Coordinates

chr5D:-:547995839..548004507

Molecular Weight (calculated)

80671.0 Da

IEP (calculated)

7.983

GRAVY (calculated)

-0.166

Length

733 amino acids

Sequence
(BLAST)

001: MVHTGPARPP AMLLAPSAGQ TWAPRPAAAP PLRRLLPAVR RARVCVPRCT SDASPPRPGA TTHSPARSKC SPLLESALLS PGGNEPPADE WKAVPDIWRT
101: AAQKYPDSVA LVDPYHDPPS ELTYKQLEQQ ILDFSHGLRA VGVAPDEKLA LFADNSCRWL VADQGIMATG AINVVRGTKS SDEELFQIYN HSESIALVVD
201: SPQFFNRLAE TFISRINARF IVLLWGDKSS LNSKAVMDIP VYDYNDITEL GQENRNALCY SSEQGRQGVF EAITPEDVAT LIYTSGTSGT PKGVMLTHRN
301: LLHQINNMWE IVPAVPGDRF LSMLPPWHAY ERSAEYFILT HGTQQIYSSV KYLKADLQKY QPHYIFSVPL VYETLYSSIQ RQISSSYPAR KTVALALIKI
401: SLLYMEAKKI FEGTVLSNNP VKPSSISYMF NCVWARIIAA LLWPLHNLAK MLVYNKIHST IGISKAAISG GGSLPMHVDK FFEAIGIKVQ NGYGLTETSP
501: AVAARRPFCN VLGTVGHPIK HTEIKIVDIE TGEVLPDGSK GIVKIKGPPV MKGYYKNPSA TNNALDQEGW FNTGDIGWIA PHHATGPSRK CGGILVLEGR
601: AKDTIVLATG ENVEPAELEE IASRSSLIDQ IMVIGQDRRR LGAIVVPNNN EALAAAKRKS SLDGNNDEAK DTVMNLLYDE LRTWMAGCSF QIGPILVVEE
701: PFTIDNGLMT PTMKIRRDRV AAKYQSEIEA LYK

Best Arabidopsis Sequence Match ( AT3G23790.1 )
(BLAST)

001: MASTSLGASI LVSHCSSAPE FQVSGMRLVF GYKAFGCRTS RRGFRVRCES KIQEKELRRC SPFLERLSLP REAALSSNEW KSVPDIWRSS VEKYGDRVAV
101: VDPYHDPPST FTYRQLEQEI LDFVEGLRVV GVKADEKIAL FADNSCRWLV ADQGIMATGA VNVVRGSRSS VEELLQIYCH SESVALVVDN PEFFNRIAES
201: FSYKAAPKFV ILLWGEKSSL VTAGRHTPVY SYNEIKKFGQ ERRAKFARSN DSGKYEYEYI DPDDIATIMY TSGTTGNPKG VMLTHQNLLH QIRNLSDFVP
301: AEAGERFLSM LPSWHAYERA CEYFIFTCGV EQKYTSIRFL KDDLKRYQPH YLISVPLVYE TLYSGIQKQI SASSPARKFL ALTLIKVSLA YTEMKRVYEG
401: LCLTKNQKPP MYIVSLVDWL WARVVAFFLW PLHMLAEKLV HRKIRSSIGI TKAGVSGGGS LPMHVDKFFE AIGVNVQNGY GLTETSPVVS ARRLRCNVLG
501: SVGHPIKDTE FKIVDHETGT VLPPGSKGIV KVRGPPVMKG YYKNPLATKQ VIDDDGWFNT GDMGWITPQH STGRSRSCGG VIVLEGRAKD TIVLSTGENV
601: EPLEIEEAAM RSNLIQQIVV IGQDQRRLGA IVIPNKEAAE GAAKQKISPV DSEVNELSKE TITSMVYEEL RKWTSQCSFQ VGPVLIVDEP FTIDNGLMTP
701: TMKIRRDKVV DQYKNEIERL YK

Arabidopsis Description

AAE16Probable acyl-activating enzyme 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.