Factsheet for TraesCS5B01G536200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G336400.4	Wheat	plastid	95.59	94.41
TraesCS5D01G533700.1	Wheat	plastid	94.62	93.59
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	85.93	82.52
HORVU1Hr1G032500.2	Barley	peroxisome	16.83	77.22
Os03t0845500-01	Rice	plastid	77.66	75.07
KXG37146	Sorghum	plastid	75.45	74.12
Zm00001d034832_P006	Maize	plastid	76.14	69.17
GSMUA_Achr8P08820_001	Banana	peroxisome	34.76	67.02
VIT_08s0032g00050.t01	Wine grape	plastid	62.62	62.19
PGSC0003DMT400053079	Potato	cytosol	52.14	60.97
AT3G23790.1	Thale cress	plastid	59.72	59.97
Bra001919.1-P	Field mustard	plastid	59.17	59.75
KRH31560	Soybean	plastid	59.31	59.72
CDY67321	Canola	plastid	58.9	59.47
KRH58837	Soybean	plastid	59.72	59.07
Bra032757.1-P	Field mustard	plastid	58.34	58.83
CDY01190	Canola	plastid	58.21	58.69
Solyc09g092450.2.1	Tomato	plastid	58.21	58.37
AT4G14070.1	Thale cress	plastid	58.48	58.32
CDY12731	Canola	plastid	57.93	57.93
CDY53212	Canola	plastid	59.31	57.49
GSMUA_Achr8P08810_001	Banana	mitochondrion	14.21	52.02
TraesCS1B01G093600.1	Wheat	peroxisome	23.03	24.93
TraesCS7B01G012700.1	Wheat	peroxisome	22.34	24.92
TraesCS5B01G147300.1	Wheat	peroxisome	20.97	22.96
TraesCS3B01G266100.1	Wheat	golgi	20.83	22.95
TraesCS5B01G415100.1	Wheat	peroxisome	20.69	22.66
TraesCS5B01G131800.3	Wheat	peroxisome	21.79	22.51
TraesCS4B01G133700.3	Wheat	peroxisome	21.24	22.13
TraesCS4B01G110600.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	21.1	21.95
TraesCS5B01G166400.1	Wheat	golgi	20.83	20.74
TraesCS5B01G118000.1	Wheat	endoplasmic reticulum	19.72	20.49
TraesCS3B01G570800.1	Wheat	peroxisome	5.1	18.05

Protein Annotations

EnsemblPlants:TraesCS5B01G536200.1	EnsemblPlantsGene:TraesCS5B01G536200	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43813	PANTHER:PTHR43813:SF2
PFAM:PF00501	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	TIGR:cd05907	MapMan:35.1

Description

No Description!

Coordinates

chr5B:-:692013040..692020848

Molecular Weight (calculated)

79745.9 Da

IEP (calculated)

8.425

GRAVY (calculated)

-0.153

Length

725 amino acids

Sequence
(BLAST)

001: MLLAPSASAS AGQTWAPRPP APPLRRRLLA ARRGRVCVPR CAGAAPPPRP GATTHSPARS KCSPLLESAL LLPGGNEPAA DEWTAVPDIW RTAAEKYPDS
101: VALVDPYHDP PSELTYKQLE QQILDFSHGL RAVGVAPDEK LALFADNSCR WLVADQGIMA TGAINVVRGT KSSDDELFQI YNHSESIALV VDSPQFFNRL
201: AESFISRINA RFIVLLWGDK SSLNSKAVMD IPVYDYNDIT VLGRENRNAL CYSSEQGRQG VFEAITPEDV ATLIYTSGTS GTPKGVMLTH RNLLHQINNM
301: WEIVPAVPGD RFLSMLPPWH AYERSAEYFI FTHGAQQIYS SVKYLKADLQ KYQPHYVFSV PLVYETLYSS IQRQISSSSR ARKTVALALI KISLLYMEAK
401: KIFEGTVLSN NPVKPSSISY MFNCLWARIV AALLWPLHNL AKMLFYKKIH STVGISKAAI SGGGSLPMHV DKFFEAIGIK VQNGYGLTET SPAVAARRPF
501: CNVLGTVGHP IKHTEIKIVD IETDEVLPDG SKGIVKIKGL PVMKGYYKNP SAANNALDQE GWFNTGDIGW IAPHHATGPS RKCGGMLVLE GRAKDTIVLA
601: TGENVEPAEL EEVASRNSLI DQIMVIGQDR RRLGAIVVPN NNEALAAAKR KSSVDGNNDE AKDTVMNLLY DELRTRMAGC SFQIGPILVV EEPFTIDNGL
701: MTPTMKIRRD RVAAKYQSEI EALYK

Best Arabidopsis Sequence Match ( AT2G47240.1 )
(BLAST)

001: MKSFAAKVEE GVKGIDGKPS VGPVYRNLLS EKGFPPIDSE ITTAWDIFSK SVEKFPDNNM LGWRRIVDEK VGPYMWKTYK EVYEEVLQIG SALRAAGAEP
101: GSRVGIYGVN CPQWIIAMEA CAAHTLICVP LYDTLGSGAV DYIVEHAEID FVFVQDTKIK GLLEPDCKCA KRLKAIVSFT NVSDELSHKA SEIGVKTYSW
201: IDFLHMGREK PEDTNPPKAF NICTIMYTSG TSGDPKGVVL THQAVATFVV GMDLYMDQFE DKMTHDDVYL SFLPLAHILD RMNEEYFFRK GASVGYYHGN
301: LNVLRDDIQE LKPTYLAGVP RVFERIHEGI QKALQELNPR RRFIFNALYK HKLAWLNRGY SHSKASPMAD FIAFRKIRDK LGGRIRLLVS GGAPLSPEIE
401: EFLRVTCCCF VVQGYGLTET LGGTALGFPD EMCMLGTVGI PAVYNEIRLE EVSEMGYDPL GENPAGEICI RGQCMFSGYY KNPELTEEVM KDGWFHTGDI
501: GEILPNGVLK IIDRKKNLIK LSQGEYVALE HLENIFGQNS VVQDIWVYGD SFKSMLVAVV VPNPETVNRW AKDLGFTKPF EELCSFPELK EHIISELKST
601: AEKNKLRKFE YIKAVTVETK PFDVERDLVT ATLKNRRNNL LKYYQVQIDE MYRKLASKKI

Arabidopsis Description

LACS1Long chain acyl-CoA synthetase 1 [Source:UniProtKB/Swiss-Prot;Acc:O22898]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.