CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001919.1-P	Field mustard	plastid	98.61	98.61
CDY53212	Canola	plastid	96.8	92.91
AT3G23790.1	Thale cress	plastid	87.19	86.7
CDY01190	Canola	plastid	75.63	75.52
CDY12731	Canola	plastid	74.79	74.07
KRH31560	Soybean	plastid	65.04	64.86
VIT_08s0032g00050.t01	Wine grape	plastid	65.88	64.79
PGSC0003DMT400053079	Potato	cytosol	55.43	64.19
GSMUA_Achr8P08820_001	Banana	peroxisome	33.57	64.1
HORVU5Hr1G120850.1	Barley	plastid	59.75	62.63
KRH58837	Soybean	plastid	63.93	62.62
Solyc09g092450.2.1	Tomato	plastid	62.95	62.52
TraesCS4A01G336400.4	Wheat	plastid	60.59	59.26
TraesCS5D01G533700.1	Wheat	plastid	60.17	58.94
TraesCS5B01G536200.1	Wheat	plastid	59.47	58.9
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	60.59	58.86
KXG37146	Sorghum	plastid	60.45	58.81
TraesCS4A01G336500.2	Wheat	mitochondrion, plastid	60.72	58.68
Os03t0845500-01	Rice	plastid	60.03	57.47
TraesCS5B01G536300.1	Wheat	mitochondrion, plastid	60.17	57.22
Zm00001d034832_P006	Maize	plastid	60.17	54.14
HORVU1Hr1G032500.2	Barley	peroxisome	11.42	51.9
GSMUA_Achr8P08810_001	Banana	mitochondrion	12.81	46.46
CDX92843	Canola	peroxisome	8.64	28.97
CDY68722	Canola	peroxisome	11.28	28.52
CDX80092	Canola	mitochondrion, peroxisome	11.56	28.33
CDY69216	Canola	peroxisome	15.88	27.67
CDY37793	Canola	peroxisome	15.88	26.45
CDX80093	Canola	peroxisome	15.88	26.45
CDY51419	Canola	peroxisome	22.98	25.0
CDY27501	Canola	peroxisome	22.84	24.85
CDY29350	Canola	peroxisome	22.84	24.62
CDY59237	Canola	peroxisome	22.7	24.47
CDY27725	Canola	plastid	22.98	24.02
CDY05217	Canola	plastid	22.98	24.02
CDY49993	Canola	mitochondrion	23.26	23.99
CDX74115	Canola	plastid	23.12	23.85
CDY47618	Canola	peroxisome	21.87	23.54
CDY03515	Canola	peroxisome	21.73	23.39
CDX80638	Canola	peroxisome	22.42	23.03
CDX86151	Canola	peroxisome	22.28	22.89
CDX86825	Canola	peroxisome	21.17	22.82
CDX68052	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	21.73	22.51
CDX79212	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	21.73	22.51
CDX95713	Canola	peroxisome	21.03	22.04
CDY15082	Canola	peroxisome	21.31	21.37
CDY66248	Canola	peroxisome	21.17	21.08
CDY40856	Canola	peroxisome	20.89	20.46
CDY25270	Canola	peroxisome	18.38	20.03
CDX94232	Canola	peroxisome	18.38	19.97
CDY65251	Canola	peroxisome	6.27	19.23
CDY46530	Canola	peroxisome	21.03	19.21
CDY72011	Canola	peroxisome	4.87	16.59
CDY71490	Canola	extracellular, peroxisome	3.48	16.23
CDY64879	Canola	peroxisome	21.17	15.83

Protein Annotations

EnsemblPlants:CDY67321	EnsemblPlantsGene:GSBRNA2T00060641001	Gene3D:3.30.300.30	Gene3D:3.40.50.12780	GO:A0A078JNN1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR43813	PANTHER:PTHR43813:SF2	PFAM:PF00501	PRINTS:PR00154	ProteinID:CDY67321	ProteinID:CDY67321.1
ScanProsite:PS00455	SUPFAM:SSF56801	UniParc:UPI0004EE9E5E	UniProt:A0A078JNN1	MapMan:35.1	:

Description

BnaA03g57590DBnaA03g57590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNN1]

Coordinates

chrLK035970:-:3487..8084

Molecular Weight (calculated)

80518.7 Da

IEP (calculated)

8.804

GRAVY (calculated)

-0.231

Length

718 amino acids

Sequence
(BLAST)

001: MTSTSLAPSV LVSRFYSSPR EFQDSGNYKC FSRRTRVPSR LRFRVQEKEL GRCSPFLERL TVPGGDASAA LRSNEWKAVP DIWRSSAEKY GDRVAVVDPY
101: HDSPSTFTYR QLEQEILDFV EGLRAVGVKA DEKIALFADN SCRWLVADQG IMATGAVNVV RGSRSSVEEL LHIYCHSDSV GLVVDNPEFF NRIADTFSYK
201: ASLKFVILLW GDKSSLVKSS RQTPVYSYNE IKNLGQQRRA EHAGSSDAGK YEYEFIGPDD TATIMYTSGT TGNPKGVMLT HQNLLHQIRN LSEFVPAKAG
301: ERFLSMLPSW HAYERACEYF IFTCGVEQKY TSIRFLKDDL KRYQPHYLIS VPLVYETLYS GIQKQISTSS PVRKFLALSL IRISLAYTEM RRVYEGLCLT
401: KNQKPPVYIV ALVDWLWARV VAFVLWPLHM LAEKLVHKKI RSSIGITKAG VSGGGSLPMH IDKFFEAIGV NVQNGYGLTE TSPVVSARRI SCHVLGSVGH
501: PIKDTEFKIV DQETGNVLPP GSKGIVKVRG PPVMRGYYKN PMATKQVIDD DGWFNTGDMG WIAPHHSTGR RRSCGGVIVL EGRAKDTIVL STGENVEPLE
601: IEEAALRSSL IQQIVVIGQD QRRLGAIVIP NKEAAEGVAK NKISAVDPEV NELSKETLTS MVYEELRKWT SECSFQVGPV LIVEEPFTID NGFMTPTMKI
701: RRDKVVDLYK DEIARLYK

Best Arabidopsis Sequence Match ( AT3G23790.1 )
(BLAST)

001: MASTSLGASI LVSHCSSAPE FQVSGMRLVF GYKAFGCRTS RRGFRVRCES KIQEKELRRC SPFLERLSLP REAALSSNEW KSVPDIWRSS VEKYGDRVAV
101: VDPYHDPPST FTYRQLEQEI LDFVEGLRVV GVKADEKIAL FADNSCRWLV ADQGIMATGA VNVVRGSRSS VEELLQIYCH SESVALVVDN PEFFNRIAES
201: FSYKAAPKFV ILLWGEKSSL VTAGRHTPVY SYNEIKKFGQ ERRAKFARSN DSGKYEYEYI DPDDIATIMY TSGTTGNPKG VMLTHQNLLH QIRNLSDFVP
301: AEAGERFLSM LPSWHAYERA CEYFIFTCGV EQKYTSIRFL KDDLKRYQPH YLISVPLVYE TLYSGIQKQI SASSPARKFL ALTLIKVSLA YTEMKRVYEG
401: LCLTKNQKPP MYIVSLVDWL WARVVAFFLW PLHMLAEKLV HRKIRSSIGI TKAGVSGGGS LPMHVDKFFE AIGVNVQNGY GLTETSPVVS ARRLRCNVLG
501: SVGHPIKDTE FKIVDHETGT VLPPGSKGIV KVRGPPVMKG YYKNPLATKQ VIDDDGWFNT GDMGWITPQH STGRSRSCGG VIVLEGRAKD TIVLSTGENV
601: EPLEIEEAAM RSNLIQQIVV IGQDQRRLGA IVIPNKEAAE GAAKQKISPV DSEVNELSKE TITSMVYEEL RKWTSQCSFQ VGPVLIVDEP FTIDNGLMTP
701: TMKIRRDKVV DQYKNEIERL YK

Arabidopsis Description

AAE16Probable acyl-activating enzyme 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.