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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29350 Canola peroxisome 98.35 98.35
AT1G49430.1 Thale cress peroxisome 90.69 90.83
KRH48841 Soybean peroxisome 24.17 73.52
VIT_03s0063g01880.t01 Wine grape peroxisome 67.87 68.59
PGSC0003DMT400064817 Potato peroxisome 67.72 68.44
KRH24533 Soybean peroxisome 67.27 68.29
KRH29538 Soybean peroxisome 67.12 68.14
Solyc01g109180.2.1 Tomato nucleus 67.42 68.13
KRG89197 Soybean peroxisome 67.27 67.88
KRH49531 Soybean peroxisome 67.12 67.73
GSMUA_Achr7P27390_001 Banana peroxisome 63.81 64.79
Os11t0558300-01 Rice peroxisome 61.86 62.33
KXG28707 Sorghum peroxisome 61.26 61.35
TraesCS5D01G420300.1 Wheat golgi 60.81 61.18
TraesCS5A01G411500.2 Wheat golgi 60.96 61.14
Zm00001d053127_P005 Maize mitochondrion 60.81 60.99
HORVU5Hr1G099350.15 Barley peroxisome 61.11 60.93
TraesCS5B01G415100.1 Wheat peroxisome 60.51 60.88
CDX86825 Canola peroxisome 53.15 53.15
CDY47618 Canola peroxisome 52.7 52.62
CDY03515 Canola peroxisome 52.4 52.32
CDY68722 Canola peroxisome 21.47 50.35
CDX94232 Canola peroxisome 49.7 50.08
CDX80092 Canola mitochondrion, peroxisome 21.92 49.83
CDY25270 Canola peroxisome 49.25 49.77
CDY40856 Canola peroxisome 53.3 48.43
CDY71490 Canola extracellular, peroxisome 10.51 45.45
CDY69216 Canola peroxisome 28.08 45.39
CDY72011 Canola peroxisome 14.26 45.02
CDY51419 Canola peroxisome 44.59 45.0
CDY27501 Canola peroxisome 44.59 45.0
CDY46530 Canola peroxisome 53.0 44.91
CDX80093 Canola peroxisome 28.23 43.62
CDY37793 Canola peroxisome 28.23 43.62
CDX95713 Canola peroxisome 41.59 40.44
CDY64879 Canola peroxisome 53.45 37.08
CDX74115 Canola plastid 38.29 36.64
CDY49993 Canola mitochondrion 38.14 36.49
CDY27725 Canola plastid 37.24 36.1
CDY05217 Canola plastid 37.24 36.1
CDX92843 Canola peroxisome 11.56 35.98
CDX86151 Canola peroxisome 36.79 35.05
CDX80638 Canola peroxisome 36.79 35.05
CDY65251 Canola peroxisome 10.51 29.91
CDX68052 Canola endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 31.08 29.87
CDX79212 Canola endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 30.93 29.73
CDY66248 Canola peroxisome 31.23 28.85
CDY15082 Canola peroxisome 30.93 28.77
CDY67321 Canola plastid 24.47 22.7
CDY01190 Canola plastid 24.02 22.25
CDY53212 Canola plastid 24.32 21.66
CDY12731 Canola plastid 23.57 21.66
Protein Annotations
EnsemblPlants:CDY59237EnsemblPlantsGene:GSBRNA2T00025752001Gene3D:3.40.50.12780GO:A0A078J524GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152InterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigPANTHER:PTHR43272PANTHER:PTHR43272:SF4
PFAM:PF00501ProteinID:CDY59237ProteinID:CDY59237.1ScanProsite:PS00455SUPFAM:SSF56801UniParc:UPI0004EAB38A
UniProt:A0A078J524MapMan:50.6.2::::
Description
BnaC05g51350DBnaC05g51350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J524]
Coordinates
chrLK033743:+:5744..12246
Molecular Weight (calculated)
74273.3 Da
IEP (calculated)
6.622
GRAVY (calculated)
-0.151
Length
666 amino acids
Sequence
(BLAST)
001: MAAAADHVVI VEEGRQATAE HPSAGPVYRC KYAKDGLLDL PADLDSPWQL FSEAVKQYPN EQMLGRRVTV DSKVGPYTWI TYREAHDAAL RIGSAIRSRG
101: VGPGNYCGIY GSNCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK ALSSILACHK ACSSNLKTIV SFGEVSTTQK EEAENQCVSL
201: FSWHEFLLMG NSDKTALPRK QKTDICTIMY TSGTTGEPKG VILSNAAIMV EVLSIDKMLQ VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VHALKPTVFC GVPRVYDKLY AGVMQKISAG GLIRKKLFDL AYNYKLGNMR KGLSQEEASP RLDRLMFDKI KDALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY EAFSGDVARG EICLRGKSMF SGYHKRQDLT DQVVINGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW IYGNSFESFL VAVVVPERKA IEDWAKLNNQ SSPSDFESLC QNLKAQKYFL
601: DELNSTAKQY QLKGFEMLKA VHLEPNLFDI ERDLITPTFK LKRPQLLKHY KSIIDQLYTE AKASRA
Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)
001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA
Arabidopsis Description
LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.