CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053127_P005	Maize	mitochondrion	93.83	93.98
Os11t0558300-01	Rice	peroxisome	85.11	85.63
TraesCS5D01G420300.1	Wheat	golgi	84.36	84.74
TraesCS5A01G411500.2	Wheat	golgi	84.51	84.64
TraesCS5B01G415100.1	Wheat	peroxisome	84.21	84.59
HORVU5Hr1G099350.15	Barley	peroxisome	84.21	83.83
KRH48841	Soybean	peroxisome	24.06	73.06
GSMUA_Achr7P27390_001	Banana	peroxisome	69.92	70.88
PGSC0003DMT400064817	Potato	peroxisome	68.57	69.2
Solyc01g109180.2.1	Tomato	nucleus	68.12	68.74
VIT_03s0063g01880.t01	Wine grape	peroxisome	66.62	67.22
KRG89197	Soybean	peroxisome	66.02	66.52
KRH49531	Soybean	peroxisome	65.71	66.21
KRH24533	Soybean	peroxisome	65.11	66.01
KRH29538	Soybean	peroxisome	65.11	66.01
AT1G49430.1	Thale cress	peroxisome	61.5	61.5
CDY59237	Canola	peroxisome	61.35	61.26
CDY29350	Canola	peroxisome	61.2	61.11
KXG27302	Sorghum	cytosol	4.96	61.11
Bra032284.1-P	Field mustard	peroxisome	61.2	61.11
EES01192	Sorghum	peroxisome	58.2	59.08
EES01271	Sorghum	peroxisome	57.74	58.01
OQU75859	Sorghum	peroxisome	55.34	56.7
KXG19348	Sorghum	peroxisome	55.19	56.55
OQU82479	Sorghum	peroxisome	55.04	50.62
KXG21217	Sorghum	peroxisome	48.12	47.76
EES15543	Sorghum	peroxisome	39.85	38.86
KXG27718	Sorghum	peroxisome	39.4	37.59
AT2G47245.1	Thale cress	endoplasmic reticulum	7.07	36.15
KXG23059	Sorghum	endoplasmic reticulum	31.73	30.23
KXG27640	Sorghum	peroxisome	32.93	30.17
OQU82968	Sorghum	endoplasmic reticulum, plasma membrane	30.68	29.27
KXG37146	Sorghum	plastid	23.46	21.14

Protein Annotations

Gene3D:3.40.50.12780	MapMan:50.6.2	UniProt:A0A1B6PSR5	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
GO:GO:0001676	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	EnsemblPlants:KXG28707	ProteinID:KXG28707	ProteinID:KXG28707.1	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF4	EnsemblPlantsGene:SORBI_3005G156100	SUPFAM:SSF56801	UniParc:UPI0003C6E222

Description

hypothetical protein

Coordinates

chr5:+:62745521..62750432

Molecular Weight (calculated)

74251.0 Da

IEP (calculated)

6.989

GRAVY (calculated)

-0.119

Length

665 amino acids

Sequence
(BLAST)

001: MSMPETFTVK VGEATPAAGG RPSAGPVYRS IYAKDGLMVL PQDIHSPWDF FSGAVKKYPI NRMLGRRQVI TDGKAGEYVW QTYEEVYQKV MRIGSAIRSL
101: GVEPGAHCGI YGSNCPEWVM AMQACNCQGI CYVPLYDTLG ANAVEFIMDH AEISIAFVQE SKIKSILAVV PKCTAHLRAI VSFGDFASEM KMEAEKLGVS
201: CFSWEEFSSM GKQDYKLPNK CKDDICTIMY TSGTTGDPKG VIITNRAIIA GIMTTEHLLK ETDKVITEED SYFSYLPLAH IFDQVIENYC ISKGASIGFW
301: QGDIRYLMED VQVMKPTIFC GVPRVYDRIY TGINMKIQSG GMIAKHLFQY AYNYKLTNMK KGLKQHEASP FFDKIVFSKI KEGLGGRIRL MIAGAAPLPG
401: QIEEFMRVTS CSVVVQGYGL TESCAGCFTS IANVFSMIGT VGPPVTTIEA RLESVPEMGY DALSDMPRGE ICLRGHTMFS GYYKRPGLTE EVFSDGWFHT
501: GDIGEWQPNG AMKIIDRKKN IFKLSQGEYV AVEVLERAYM QSPLVASVWV YGNSFESFLV AVVVPERQAL EEWAAANNKA GDFAELCIDP KARSYIQDQL
601: NQTGKKLGLR GFEMLKAVYL EPVPFSIEKD LITPTFKLKR PQLLKYYKDR IDQMYKDAKE GRTAP

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.