Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
- plastid 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053009_P009 | Maize | plastid | 96.13 | 95.99 |
| Os11t0169800-01 | Rice | plastid | 47.2 | 90.63 |
| TraesCS4B01G110600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 85.8 | 85.8 |
| HORVU4Hr1G019780.1 | Barley | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 85.51 | 85.51 |
| TraesCS4D01G108300.1 | Wheat | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 85.22 | 85.22 |
| TraesCS4A01G207000.1 | Wheat | golgi | 85.37 | 85.0 |
| KXG23059 | Sorghum | endoplasmic reticulum | 83.79 | 83.67 |
| GSMUA_Achr8P30270_001 | Banana | peroxisome, plastid | 77.19 | 77.19 |
| Solyc11g018580.1.1 | Tomato | plastid | 66.57 | 76.07 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 75.75 | 75.75 |
| GSMUA_Achr1P13190_001 | Banana | vacuole | 69.73 | 75.7 |
| PGSC0003DMT400002337 | Potato | mitochondrion | 74.61 | 74.71 |
| VIT_18s0001g02810.t01 | Wine grape | vacuole | 73.89 | 73.89 |
| GSMUA_Achr2P08130_001 | Banana | peroxisome, plastid | 58.97 | 72.49 |
| AT1G77590.1 | Thale cress | peroxisome, plastid | 70.44 | 71.06 |
| CDX79212 | Canola | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 70.3 | 70.71 |
| CDX68052 | Canola | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 70.3 | 70.71 |
| Bra003678.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 70.16 | 70.56 |
| KRH18736 | Soybean | peroxisome, plastid | 69.73 | 69.83 |
| KRH53234 | Soybean | mitochondrion | 69.44 | 69.74 |
| KRH16338 | Soybean | plastid, vacuole | 60.55 | 65.22 |
| KXG27640 | Sorghum | peroxisome | 63.27 | 60.74 |
| EES01271 | Sorghum | peroxisome | 32.14 | 33.84 |
| OQU75859 | Sorghum | peroxisome | 31.13 | 33.44 |
| KXG19348 | Sorghum | peroxisome | 30.56 | 32.82 |
| EES01192 | Sorghum | peroxisome | 30.7 | 32.67 |
| KXG21217 | Sorghum | peroxisome | 30.13 | 31.34 |
| KXG28707 | Sorghum | peroxisome | 29.27 | 30.68 |
| KXG27718 | Sorghum | peroxisome | 30.13 | 30.13 |
| EES15543 | Sorghum | peroxisome | 29.41 | 30.06 |
| OQU82479 | Sorghum | peroxisome | 31.13 | 30.01 |
| KXG27302 | Sorghum | cytosol | 2.15 | 27.78 |
| KXG37146 | Sorghum | plastid | 21.66 | 20.46 |
Protein Annotations
| EnsemblPlants:OQU82968 | EnsemblPlantsGene:SORBI_3005G054900 | Gene3D:3.40.50.12780 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | PANTHER:PTHR43272 | PANTHER:PTHR43272:SF29 | PFAM:PF00501 |
| ProteinID:OQU82967.1 | ProteinID:OQU82968 | ProteinID:OQU82968.1 | ScanProsite:PS00455 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF56801 | UniParc:UPI000B4252AB | UniProt:A0A1Z5RH07 | MapMan:50.6.2 | : | : |
Description
hypothetical protein
Coordinates
chr5:+:5559616..5564836
Molecular Weight (calculated)
76435.9 Da
IEP (calculated)
8.255
GRAVY (calculated)
-0.003
Length
697 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPYFLGFIL PFVASLLLTK RKSEKKRGVP VNVGGEPGCA IRNHRFERPV ETRWEGISTL AELFEQSCKQ FACMPLLGTR KLIAREMVVA ADGRSFEKLH
101: LGNYEWKSYA DAFKTVCNFA SGLLRIGHLK DERVAIFADT RAEWQIALQA CFRQNIAVVT IYASLGEGAL CHSLNETEVT TVVCGRKELK KLIDISGQLD
201: TVKHVIYINE EGVSAEVSLA QNCTSWTVMS FEEVESIGLQ RPVEENLPLA SDTAVIMYTS GSTGMPKGVM MSHRNVLAVV SAVMTIVPGL GKKDVYLAYL
301: PLAHILELAA EAIITGVGAS IGYGSPLTLT DTSNKIKKGT QGDASVLKPT LMTAVPAILD HVRDGVRKNV DAKGGLAKRL FDIAYSRRLA AVNGSWLGAW
401: GLEKLLWDML VFQKVRAILG GRIRFILAGG APLSGDTQRF INICLGAPIS QGYGLTETCA GGTFSEYDET SVGRVGPPLP CSYIKLVDWA EGGYLTTDSP
501: MPRGEIVIGG PSVTKGYFKN EAKTNEVYKV DERGMRWFYS GDIGRLHPDG CLEIIDRKKD IVKLQHGEYV SLGKVEAALS VCSYVDQIMI HADPFHNYCV
601: ALIVAAQSEL KNWASKQGMT YSDFSDLCQK QGTVKEVLQS LVKAAKQARL EKFEIPAKIK LIPEPWTPES GLVTAALKLK REVIKKAYEI DLAQLYS
101: LGNYEWKSYA DAFKTVCNFA SGLLRIGHLK DERVAIFADT RAEWQIALQA CFRQNIAVVT IYASLGEGAL CHSLNETEVT TVVCGRKELK KLIDISGQLD
201: TVKHVIYINE EGVSAEVSLA QNCTSWTVMS FEEVESIGLQ RPVEENLPLA SDTAVIMYTS GSTGMPKGVM MSHRNVLAVV SAVMTIVPGL GKKDVYLAYL
301: PLAHILELAA EAIITGVGAS IGYGSPLTLT DTSNKIKKGT QGDASVLKPT LMTAVPAILD HVRDGVRKNV DAKGGLAKRL FDIAYSRRLA AVNGSWLGAW
401: GLEKLLWDML VFQKVRAILG GRIRFILAGG APLSGDTQRF INICLGAPIS QGYGLTETCA GGTFSEYDET SVGRVGPPLP CSYIKLVDWA EGGYLTTDSP
501: MPRGEIVIGG PSVTKGYFKN EAKTNEVYKV DERGMRWFYS GDIGRLHPDG CLEIIDRKKD IVKLQHGEYV SLGKVEAALS VCSYVDQIMI HADPFHNYCV
601: ALIVAAQSEL KNWASKQGMT YSDFSDLCQK QGTVKEVLQS LVKAAKQARL EKFEIPAKIK LIPEPWTPES GLVTAALKLK REVIKKAYEI DLAQLYS
001: MIPYAAGVIV PLALTFLVQK SKKEKKRGVV VDVGGEPGYA IRNHRFTEPV SSHWEHISTL PELFEISCNA HSDRVFLGTR KLISREIETS EDGKTFEKLH
101: LGDYEWLTFG KTLEAVCDFA SGLVQIGHKT EERVAIFADT REEWFISLQG CFRRNVTVVT IYSSLGEEAL CHSLNETEVT TVICGSKELK KLMDISQQLE
201: TVKRVICMDD EFPSDVNSNW MATSFTDVQK LGRENPVDPN FPLSADVAVI MYTSGSTGLP KGVMMTHGNV LATVSAVMTI VPDLGKRDIY MAYLPLAHIL
301: ELAAESVMAT IGSAIGYGSP LTLTDTSNKI KKGTKGDVTA LKPTIMTAVP AILDRVRDGV RKKVDAKGGL SKKLFDFAYA RRLSAINGSW FGAWGLEKLL
401: WDVLVFRKIR AVLGGQIRYL LSGGAPLSGD TQRFINICVG APIGQGYGLT ETCAGGTFSE FEDTSVGRVG APLPCSFVKL VDWAEGGYLT SDKPMPRGEI
501: VIGGSNITLG YFKNEEKTKE VYKVDEKGMR WFYTGDIGRF HPDGCLEIID RKKDIVKLQH GEYVSLGKVE AALSISPYVE NIMVHADSFY SYCVALVVAS
601: QHTVEGWASK QGIDFANFEE LCTKEQAVKE VYASLVKAAK QSRLEKFEIP AKIKLLASPW TPESGLVTAA LKLKRDVIRR EFSEDLTKLY A
101: LGDYEWLTFG KTLEAVCDFA SGLVQIGHKT EERVAIFADT REEWFISLQG CFRRNVTVVT IYSSLGEEAL CHSLNETEVT TVICGSKELK KLMDISQQLE
201: TVKRVICMDD EFPSDVNSNW MATSFTDVQK LGRENPVDPN FPLSADVAVI MYTSGSTGLP KGVMMTHGNV LATVSAVMTI VPDLGKRDIY MAYLPLAHIL
301: ELAAESVMAT IGSAIGYGSP LTLTDTSNKI KKGTKGDVTA LKPTIMTAVP AILDRVRDGV RKKVDAKGGL SKKLFDFAYA RRLSAINGSW FGAWGLEKLL
401: WDVLVFRKIR AVLGGQIRYL LSGGAPLSGD TQRFINICVG APIGQGYGLT ETCAGGTFSE FEDTSVGRVG APLPCSFVKL VDWAEGGYLT SDKPMPRGEI
501: VIGGSNITLG YFKNEEKTKE VYKVDEKGMR WFYTGDIGRF HPDGCLEIID RKKDIVKLQH GEYVSLGKVE AALSISPYVE NIMVHADSFY SYCVALVVAS
601: QHTVEGWASK QGIDFANFEE LCTKEQAVKE VYASLVKAAK QSRLEKFEIP AKIKLLASPW TPESGLVTAA LKLKRDVIRR EFSEDLTKLY A
Arabidopsis Description
LACS9Long chain acyl-CoA synthetase 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CAP8]
SUBAcon: [peroxisome,plastid]
SUBAcon: [peroxisome,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.