Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- golgi 3
- extracellular 3
- plastid 3
- peroxisome 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX79212 | Canola | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 92.19 | 91.92 |
| CDX68052 | Canola | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 91.9 | 91.63 |
| Bra003678.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 91.75 | 91.49 |
| VIT_18s0001g02810.t01 | Wine grape | vacuole | 78.15 | 77.47 |
| Os11t0169800-01 | Rice | plastid | 40.52 | 77.14 |
| Solyc11g018580.1.1 | Tomato | plastid | 67.0 | 75.9 |
| GSMUA_Achr8P30270_001 | Banana | peroxisome, plastid | 75.4 | 74.75 |
| PGSC0003DMT400002337 | Potato | mitochondrion | 75.25 | 74.71 |
| GSMUA_Achr1P13190_001 | Banana | vacuole | 69.03 | 74.3 |
| KRH18736 | Soybean | peroxisome, plastid | 74.53 | 73.99 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 74.53 | 73.89 |
| TraesCS5A01G117700.1 | Wheat | endoplasmic reticulum, vacuole | 74.24 | 73.5 |
| TraesCS5B01G118000.1 | Wheat | endoplasmic reticulum | 74.24 | 73.5 |
| TraesCS5D01G129800.1 | Wheat | golgi | 74.24 | 73.5 |
| KRH53234 | Soybean | mitochondrion | 73.37 | 73.05 |
| KXG23059 | Sorghum | endoplasmic reticulum | 73.66 | 72.92 |
| HORVU5Hr1G036460.1 | Barley | endoplasmic reticulum | 73.52 | 72.78 |
| Zm00001d023538_P002 | Maize | plastid | 72.94 | 72.21 |
| Os12t0168700-01 | Rice | vacuole | 72.94 | 72.21 |
| TraesCS4D01G108300.1 | Wheat | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 71.78 | 71.16 |
| HORVU4Hr1G019780.1 | Barley | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 71.64 | 71.02 |
| TraesCS4B01G110600.1 | Wheat | endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 71.49 | 70.88 |
| TraesCS4A01G207000.1 | Wheat | golgi | 71.78 | 70.86 |
| GSMUA_Achr2P08130_001 | Banana | peroxisome, plastid | 58.03 | 70.72 |
| OQU82968 | Sorghum | endoplasmic reticulum, plasma membrane | 71.06 | 70.44 |
| Zm00001d053009_P009 | Maize | plastid | 70.91 | 70.2 |
| KRH16338 | Soybean | plastid, vacuole | 64.98 | 69.4 |
| AT2G04350.1 | Thale cress | peroxisome | 65.41 | 62.78 |
| AT4G23850.1 | Thale cress | peroxisome | 31.11 | 32.28 |
| AT1G64400.1 | Thale cress | cytosol, peroxisome, plastid | 30.25 | 31.43 |
| AT3G05970.1 | Thale cress | plastid | 31.84 | 31.38 |
| AT2G47240.2 | Thale cress | peroxisome | 29.96 | 31.36 |
| AT4G11030.1 | Thale cress | peroxisome | 29.81 | 30.93 |
| AT1G49430.1 | Thale cress | peroxisome | 29.38 | 30.53 |
| AT5G27600.1 | Thale cress | peroxisome, plastid | 30.82 | 30.43 |
| AT3G23790.1 | Thale cress | plastid | 23.44 | 22.44 |
| AT4G14070.1 | Thale cress | plastid | 22.58 | 21.46 |
| AT2G47245.1 | Thale cress | endoplasmic reticulum | 3.47 | 18.46 |
Protein Annotations
| Gene3D:3.40.50.12780 | MapMan:50.6.2 | EntrezGene:844094 | ProteinID:AAG51668.1 | ProteinID:AEE35996.1 | EMBL:AF503759 |
| EMBL:AK230143 | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | ArrayExpress:AT1G77590 | EnsemblPlantsGene:AT1G77590 | RefSeq:AT1G77590 |
| TAIR:AT1G77590 | RefSeq:AT1G77590-TAIR-G | EnsemblPlants:AT1G77590.1 | TAIR:AT1G77590.1 | Unigene:At.28137 | EMBL:BT002872 |
| GO:GO:0000166 | GO:GO:0001676 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004467 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 |
| GO:GO:0006631 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009941 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016874 | GO:GO:0102391 | Symbol:LACS9 | RefSeq:NP_177882.1 |
| PFAM:PF00501 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 |
| PO:PO:0007057 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00455 | PANTHER:PTHR43272 |
| PANTHER:PTHR43272:SF29 | UniProt:Q9CAP8 | SUPFAM:SSF56801 | UniParc:UPI000004BF36 | : | : |
Description
LACS9Long chain acyl-CoA synthetase 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CAP8]
Coordinates
chr1:-:29148160..29152395
Molecular Weight (calculated)
76179.9 Da
IEP (calculated)
6.970
GRAVY (calculated)
-0.065
Length
691 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPYAAGVIV PLALTFLVQK SKKEKKRGVV VDVGGEPGYA IRNHRFTEPV SSHWEHISTL PELFEISCNA HSDRVFLGTR KLISREIETS EDGKTFEKLH
101: LGDYEWLTFG KTLEAVCDFA SGLVQIGHKT EERVAIFADT REEWFISLQG CFRRNVTVVT IYSSLGEEAL CHSLNETEVT TVICGSKELK KLMDISQQLE
201: TVKRVICMDD EFPSDVNSNW MATSFTDVQK LGRENPVDPN FPLSADVAVI MYTSGSTGLP KGVMMTHGNV LATVSAVMTI VPDLGKRDIY MAYLPLAHIL
301: ELAAESVMAT IGSAIGYGSP LTLTDTSNKI KKGTKGDVTA LKPTIMTAVP AILDRVRDGV RKKVDAKGGL SKKLFDFAYA RRLSAINGSW FGAWGLEKLL
401: WDVLVFRKIR AVLGGQIRYL LSGGAPLSGD TQRFINICVG APIGQGYGLT ETCAGGTFSE FEDTSVGRVG APLPCSFVKL VDWAEGGYLT SDKPMPRGEI
501: VIGGSNITLG YFKNEEKTKE VYKVDEKGMR WFYTGDIGRF HPDGCLEIID RKKDIVKLQH GEYVSLGKVE AALSISPYVE NIMVHADSFY SYCVALVVAS
601: QHTVEGWASK QGIDFANFEE LCTKEQAVKE VYASLVKAAK QSRLEKFEIP AKIKLLASPW TPESGLVTAA LKLKRDVIRR EFSEDLTKLY A
101: LGDYEWLTFG KTLEAVCDFA SGLVQIGHKT EERVAIFADT REEWFISLQG CFRRNVTVVT IYSSLGEEAL CHSLNETEVT TVICGSKELK KLMDISQQLE
201: TVKRVICMDD EFPSDVNSNW MATSFTDVQK LGRENPVDPN FPLSADVAVI MYTSGSTGLP KGVMMTHGNV LATVSAVMTI VPDLGKRDIY MAYLPLAHIL
301: ELAAESVMAT IGSAIGYGSP LTLTDTSNKI KKGTKGDVTA LKPTIMTAVP AILDRVRDGV RKKVDAKGGL SKKLFDFAYA RRLSAINGSW FGAWGLEKLL
401: WDVLVFRKIR AVLGGQIRYL LSGGAPLSGD TQRFINICVG APIGQGYGLT ETCAGGTFSE FEDTSVGRVG APLPCSFVKL VDWAEGGYLT SDKPMPRGEI
501: VIGGSNITLG YFKNEEKTKE VYKVDEKGMR WFYTGDIGRF HPDGCLEIID RKKDIVKLQH GEYVSLGKVE AALSISPYVE NIMVHADSFY SYCVALVVAS
601: QHTVEGWASK QGIDFANFEE LCTKEQAVKE VYASLVKAAK QSRLEKFEIP AKIKLLASPW TPESGLVTAA LKLKRDVIRR EFSEDLTKLY A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.