Factsheet for HORVU5Hr1G036460.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 1
plastid 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G117700.1	Wheat	endoplasmic reticulum, vacuole	97.28	97.28
TraesCS5D01G129800.1	Wheat	golgi	97.28	97.28
TraesCS5B01G118000.1	Wheat	endoplasmic reticulum	97.13	97.13
KXG23059	Sorghum	endoplasmic reticulum	87.97	87.97
Zm00001d023538_P002	Maize	plastid	87.39	87.39
Os12t0168700-01	Rice	vacuole	87.25	87.25
HORVU4Hr1G019780.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	80.23	80.34
GSMUA_Achr8P30270_001	Banana	peroxisome, plastid	78.08	78.19
GSMUA_Achr11P...	Banana	endoplasmic reticulum	76.22	76.33
GSMUA_Achr1P13190_001	Banana	vacuole	69.05	75.08
Solyc11g018580.1.1	Tomato	plastid	65.04	74.43
VIT_18s0001g02810.t01	Wine grape	vacuole	73.78	73.89
PGSC0003DMT400002337	Potato	mitochondrion	73.64	73.85
AT1G77590.1	Thale cress	peroxisome, plastid	72.78	73.52
GSMUA_Achr2P08130_001	Banana	peroxisome, plastid	59.6	73.37
CDX79212	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	72.35	72.87
CDX68052	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	72.35	72.87
Bra003678.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	72.21	72.73
KRH18736	Soybean	peroxisome, plastid	70.63	70.83
KRH53234	Soybean	mitochondrion	70.06	70.46
KRH16338	Soybean	plastid, vacuole	61.6	66.46
HORVU5Hr1G052100.13	Barley	peroxisome	62.03	58.91
HORVU3Hr1G059140.1	Barley	peroxisome	30.52	32.37
HORVU5Hr1G099350.15	Barley	peroxisome	30.23	31.59
HORVU5Hr1G046950.26	Barley	peroxisome	30.66	31.42
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	30.8	30.11
HORVU5Hr1G040740.17	Barley	peroxisome	29.23	28.53
HORVU4Hr1G025820.9	Barley	peroxisome, plastid	29.66	27.6
HORVU1Hr1G016200.16	Barley	peroxisome	30.8	27.56
HORVU1Hr1G027510.1	Barley	cytosol	1.86	24.07
HORVU5Hr1G120850.1	Barley	plastid	22.06	22.48
HORVU1Hr1G032500.2	Barley	peroxisome	4.58	20.25

Protein Annotations

EnsemblPlants:HORVU5Hr1G036460.1	EnsemblPlantsGene:HORVU5Hr1G036460	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF15	PFAM:PF00501
ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	UniParc:UPI000294EB95	UniProt:M0V059	MapMan:50.6.2

Description

No Description!

Coordinates

chrchr5H:-:257988740..257995792

Molecular Weight (calculated)

76734.7 Da

IEP (calculated)

7.055

GRAVY (calculated)

-0.077

Length

698 amino acids

Sequence
(BLAST)

001: MNPYFVGLLV PIAVSLLLQK KRKVEKKRGV PVDVGGEPGY AIRNHRFERP VETHWEGVNT LAELFEHACK EYVYMPLLGT RKLISREIES SPDGRSFEKL
101: HLGDYEWKCY AEAFKSVCNF SSGLVNLGRQ NNERVAIFAE TQAEWQIALQ ACFRQNITVV TIYASLGEEA LCHSLNETEV TTVVCGRKEF KKLIDIGWQL
201: DTVKRVIYIN EDGISAEVSI AQNSTSWSVK SFEEVGKLGA EAPVDANMPL PSDVAVIMYT SGSTGLPKGV MMTHRNVLAT LSAVMTIVPE LGRKDIYMAY
301: LPLAHILELA AETLMAAVGA SIGYGSALTL TDTSSKIKKG TLGDASALRP TLMTAVPAIL DRVRDGVRKK VDAKGGVAKK LFDIGYSRRL AAISGSWLGA
401: WGVEKLLWDR LVFMKVRAIL GGNIRFVLSG GAPLSGDTQR FINICLGAPI GQGYGLTETC AGGTFSEYDD TSVGRVGAPL PCSYIKLIDW AEGGYLTTDS
501: PMPRGEIVIG GPNVTKGYFK NEAKTNEVYK DDEKGLRWFY SGDIGRFHPD GCLEIIDRKK DIVKLQHGEY VSLGKVEAAL AMNPYVENIM IHADPFHSYC
601: VALVVAAQNE LEKWALQQGL AYTDFADLCQ KQEAVVEVLG SLTKAAKQAR LEKFETPAKV KLMPDPWTPE SGLVTAALKL KREVIRKTYE DDLAQLYA

Best Arabidopsis Sequence Match ( AT1G77590.1 )
(BLAST)

001: MIPYAAGVIV PLALTFLVQK SKKEKKRGVV VDVGGEPGYA IRNHRFTEPV SSHWEHISTL PELFEISCNA HSDRVFLGTR KLISREIETS EDGKTFEKLH
101: LGDYEWLTFG KTLEAVCDFA SGLVQIGHKT EERVAIFADT REEWFISLQG CFRRNVTVVT IYSSLGEEAL CHSLNETEVT TVICGSKELK KLMDISQQLE
201: TVKRVICMDD EFPSDVNSNW MATSFTDVQK LGRENPVDPN FPLSADVAVI MYTSGSTGLP KGVMMTHGNV LATVSAVMTI VPDLGKRDIY MAYLPLAHIL
301: ELAAESVMAT IGSAIGYGSP LTLTDTSNKI KKGTKGDVTA LKPTIMTAVP AILDRVRDGV RKKVDAKGGL SKKLFDFAYA RRLSAINGSW FGAWGLEKLL
401: WDVLVFRKIR AVLGGQIRYL LSGGAPLSGD TQRFINICVG APIGQGYGLT ETCAGGTFSE FEDTSVGRVG APLPCSFVKL VDWAEGGYLT SDKPMPRGEI
501: VIGGSNITLG YFKNEEKTKE VYKVDEKGMR WFYTGDIGRF HPDGCLEIID RKKDIVKLQH GEYVSLGKVE AALSISPYVE NIMVHADSFY SYCVALVVAS
601: QHTVEGWASK QGIDFANFEE LCTKEQAVKE VYASLVKAAK QSRLEKFEIP AKIKLLASPW TPESGLVTAA LKLKRDVIRR EFSEDLTKLY A

Arabidopsis Description

LACS9Long chain acyl-CoA synthetase 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CAP8]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.