Factsheet for HORVU7Hr1G024350.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 3
vacuole 3
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
TargetP:	secretory
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G110700.1	Wheat	peroxisome	87.82	96.46
TraesCS7B01G012700.1	Wheat	peroxisome	87.25	95.85
TraesCS7A01G115900.1	Wheat	peroxisome	84.45	95.56
Os06t0158000-01	Rice	plasma membrane	70.31	81.63
OQU75859	Sorghum	peroxisome	72.69	79.97
KXG19348	Sorghum	peroxisome	72.27	79.51
Zm00001d045295_P001	Maize	extracellular	72.69	76.89
VIT_02s0025g01410.t01	Wine grape	peroxisome	60.92	65.71
Bra013735.1-P	Field mustard	peroxisome	57.14	65.49
HORVU3Hr1G059140.1	Barley	peroxisome	59.66	64.74
KRH27846	Soybean	peroxisome	59.8	64.4
KRH77642	Soybean	endoplasmic reticulum	60.08	63.93
CDY47618	Canola	peroxisome	59.52	63.72
CDY03515	Canola	peroxisome	59.38	63.57
HORVU5Hr1G046950.26	Barley	peroxisome	60.5	63.44
AT4G23850.1	Thale cress	peroxisome	58.96	63.21
PGSC0003DMT400000613	Potato	peroxisome	57.98	63.11
Bra033159.1-P	Field mustard	peroxisome	53.36	63.08
Solyc01g095750.2.1	Tomato	peroxisome	57.84	62.48
KRH60037	Soybean	peroxisome	57.84	62.11
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	57.14	61.35
CDX86825	Canola	peroxisome	57.14	61.26
Bra035259.1-P	Field mustard	peroxisome	57.14	61.26
AT4G11030.1	Thale cress	peroxisome	56.44	60.51
CDX94232	Canola	peroxisome	53.64	57.94
CDY25270	Canola	peroxisome	53.36	57.81
CDY40856	Canola	peroxisome	56.72	55.25
KRH41306	Soybean	peroxisome	19.75	55.08
KRG94065	Soybean	vacuole	13.87	54.1
CDY46530	Canola	peroxisome	57.56	52.29
HORVU5Hr1G099350.15	Barley	peroxisome	48.74	52.1
Bra027700.1-P	Field mustard	peroxisome	57.98	50.12
CDY64879	Canola	peroxisome	57.98	43.12
HORVU1Hr1G016200.16	Barley	peroxisome	45.24	41.41
HORVU5Hr1G040740.17	Barley	peroxisome	35.15	35.1
HORVU4Hr1G025820.9	Barley	peroxisome, plastid	35.71	34.0
HORVU4Hr1G019780.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	30.25	30.99
HORVU5Hr1G036460.1	Barley	endoplasmic reticulum	30.11	30.8
HORVU5Hr1G052100.13	Barley	peroxisome	29.97	29.12
HORVU1Hr1G027510.1	Barley	cytosol	2.1	27.78
HORVU5Hr1G120850.1	Barley	plastid	22.27	23.21
HORVU1Hr1G032500.2	Barley	peroxisome	3.92	17.72

Protein Annotations

EnsemblPlants:HORVU7Hr1G024350.1	EnsemblPlantsGene:HORVU7Hr1G024350	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
PANTHER:PTHR43272	PANTHER:PTHR43272:SF18	PFAM:PF00501	ScanProsite:PS00455	SEG:seg	SignalP:SignalP-TM
SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI000B47D5BA	UniProt:A0A287VQC5	MapMan:50.6.2	:

Description

No Description!

Coordinates

chrchr7H:-:39115705..39126858

Molecular Weight (calculated)

78257.8 Da

IEP (calculated)

6.512

GRAVY (calculated)

0.052

Length

714 amino acids

Sequence
(BLAST)

001: FQHVSQRLSL SIYIYILLLL PISLSLSIPA SCQQLPFSVL PSPTFLPSLS SRTAVVASTV GAEAMKFLVE SGGAEGNAGP SYRNVLAKDA GLLQTPPGVD
101: CLWDLFCASV EKYPSNPMLG RRPVVDGKAG DYAWMTYREV CDVVIKLAAS MSKSGVRQGE RVGIYGANCP EWIISMEACN ALGVCCVPLY DTLGANAVEF
201: ITCHAELLIA FVEEKKIGEL LKTCHATSKY LKTIVSFGAV TNDQKEEAKN HGLSIFSWEE FLVMGGDEPV DLPEKKKSDI CTIMYTSGTT GDPKGVMISN
301: ESLLINLAGA DSVVQSIGEA FNQDDVYLSY LPLAHVFDRM FEEVFISHGS RIGFWRGDVK LLVDDIAALR PTVFCAVPRV LDRIYSGLTT KISAGGILKK
401: TLFNLGYKMK LDSMKKGIKH EKASPFFDKL IFSKVKERLG GKIRIIVSGG APLAVAVEEF LRVVTCAHVV QGYGLTETCA GSFAAIPNEF SMVGTVGPPV
501: PHMDVRLESV SEMGYDALAS IPRGEVCVKG SVLFSGYYKR EDLTREVLTD GWFHTGDVGE WQTNGALKII DRKKNIFKLS QGEYVAVENL ENIYGVLPEI
601: DSIWVYGNSF ESFLIAVINP NQQALENWAG QNGIAGSLAE LCENAKTKEH FIAELAKAAK EKKLKGFEFI KAVHLDAVPF DMERNLITPT YKKKRPQMLQ
701: YYQGAIDALY KSSK

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.