Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400000613 | Potato | peroxisome | 96.82 | 97.56 |
| Solyc08g082280.2.1 | Tomato | nucleus, plastid | 67.17 | 67.48 |
| Solyc08g008310.2.1 | Tomato | peroxisome | 60.67 | 67.17 |
| OQU75859 | Sorghum | peroxisome | 63.54 | 64.71 |
| KXG19348 | Sorghum | peroxisome | 62.93 | 64.1 |
| TraesCS7B01G012700.1 | Wheat | peroxisome | 62.93 | 64.0 |
| TraesCS7D01G110700.1 | Wheat | peroxisome | 62.48 | 63.54 |
| Os06t0158000-01 | Rice | plasma membrane | 59.0 | 63.41 |
| TraesCS7A01G115900.1 | Wheat | peroxisome | 60.21 | 63.07 |
| Zm00001d045295_P001 | Maize | extracellular | 63.69 | 62.37 |
| HORVU7Hr1G024350.1 | Barley | endoplasmic reticulum, vacuole | 62.48 | 57.84 |
| Solyc01g109180.2.1 | Tomato | nucleus | 54.46 | 54.63 |
| Solyc09g075790.2.1 | Tomato | peroxisome | 34.19 | 35.99 |
| Solyc01g099100.2.1 | Tomato | plastid | 37.37 | 35.49 |
| Solyc09g075770.1.1 | Tomato | peroxisome | 36.91 | 34.96 |
| Solyc11g018580.1.1 | Tomato | plastid | 29.5 | 31.97 |
| Solyc07g045290.2.1 | Tomato | plastid | 32.83 | 29.89 |
| Solyc12g009040.1.1 | Tomato | plastid | 31.01 | 28.55 |
| Solyc09g092450.2.1 | Tomato | plastid | 23.15 | 21.16 |
Protein Annotations
| EnsemblPlants:Solyc01g095750.2.1 | EnsemblPlantsGene:Solyc01g095750.2 | Gene3D:3.40.50.12780 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | PANTHER:PTHR43272 | PANTHER:PTHR43272:SF9 | PFAM:PF00501 |
| ScanProsite:PS00455 | SUPFAM:SSF56801 | UniParc:UPI00027674F2 | UniProt:K4AZW4 | MapMan:50.6.2 | : |
Description
No Description!
Coordinates
chr1:-:86945274..86951975
Molecular Weight (calculated)
74187.6 Da
IEP (calculated)
7.225
GRAVY (calculated)
-0.159
Length
661 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDQKKLYVF EVEKAKEVRS NGRPSRGPVY RNVLAKDGFR PLSQSLQSCW DIFCESVRKF PHNRMLGERE MSHGQAGKYI WLTYREVYDL VLKVGASMRV
101: CGVKQGGKCG IYGANCSNWV ISMQACNALG LYCVPLYDTL GAGAVEYIIC HAEVSVAFAE ETKIFEVLKA FPNAGKFLKS LISFGKVTQE QKDMAGNFDL
201: KLYSWDEFLL LGMQEKFDLP AKKKTDICTI MYTSGTTGDP KGVMISNESI LSLISGVNHH METVGEEFTD KDVYLSYLPL AHIFDRVIEE LFISKGASVG
301: FWHKDVKQLI DDIKELKPTV FCSVPRVLDK IYSGLVEKIS CAGFLKHKLF NFTYNYKLGN MSKGYRHSEA APIFDKIIFN KVKEGLGGNL RLILSGAAPL
401: SSTVETYLRV VTCANVLQGY GLTETCAGSF VARPDELAMV GTVGPPLPII DVCLESVPEM GYDALGDTPR GEICIRGKCL FSGYYKREDL TKEVLVDGWF
501: HTGDVGEWQP DGSMKIVDRK KNIFKLSQGE YVAVENLEGI YSLASSVDSI WIYGSSYESF LVAVVNPNME ALRSWANENG MTGDFDTICE NPKAKAYILS
601: ELTNIAKEKK LKGFEFIKAV HLDPVPFDME RELITPTHKK KRAQFLKYYQ NNIDTLYKNT R
101: CGVKQGGKCG IYGANCSNWV ISMQACNALG LYCVPLYDTL GAGAVEYIIC HAEVSVAFAE ETKIFEVLKA FPNAGKFLKS LISFGKVTQE QKDMAGNFDL
201: KLYSWDEFLL LGMQEKFDLP AKKKTDICTI MYTSGTTGDP KGVMISNESI LSLISGVNHH METVGEEFTD KDVYLSYLPL AHIFDRVIEE LFISKGASVG
301: FWHKDVKQLI DDIKELKPTV FCSVPRVLDK IYSGLVEKIS CAGFLKHKLF NFTYNYKLGN MSKGYRHSEA APIFDKIIFN KVKEGLGGNL RLILSGAAPL
401: SSTVETYLRV VTCANVLQGY GLTETCAGSF VARPDELAMV GTVGPPLPII DVCLESVPEM GYDALGDTPR GEICIRGKCL FSGYYKREDL TKEVLVDGWF
501: HTGDVGEWQP DGSMKIVDRK KNIFKLSQGE YVAVENLEGI YSLASSVDSI WIYGSSYESF LVAVVNPNME ALRSWANENG MTGDFDTICE NPKAKAYILS
601: ELTNIAKEKK LKGFEFIKAV HLDPVPFDME RELITPTHKK KRAQFLKYYQ NNIDTLYKNT R
001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG
Arabidopsis Description
LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.