Factsheet for AT4G11030.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033159.1-P	Field mustard	peroxisome	81.98	90.4
Bra035259.1-P	Field mustard	peroxisome	90.24	90.24
CDX86825	Canola	peroxisome	90.09	90.09
CDX94232	Canola	peroxisome	85.89	86.54
CDY25270	Canola	peroxisome	85.44	86.34
CDY40856	Canola	peroxisome	89.94	81.72
AT4G23850.1	Thale cress	peroxisome	80.18	80.18
Solyc08g082280.2.1	Tomato	nucleus, plastid	72.97	73.86
VIT_02s0025g01410.t01	Wine grape	peroxisome	73.12	73.56
Solyc08g008310.2.1	Tomato	peroxisome	65.17	72.7
KRH77642	Soybean	endoplasmic reticulum	72.67	72.13
KRH27846	Soybean	peroxisome	71.77	72.1
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	71.02	71.13
GSMUA_Achr3P32060_001	Banana	peroxisome	68.92	70.08
KRH60037	Soybean	peroxisome	69.82	69.92
GSMUA_Achr6P14370_001	Banana	peroxisome	68.32	69.47
TraesCS5B01G147300.1	Wheat	peroxisome	67.72	68.13
Zm00001d044016_P001	Maize	mitochondrion	66.97	68.09
TraesCS5A01G148700.1	Wheat	peroxisome	68.02	67.92
TraesCS5D01G144200.2	Wheat	peroxisome	68.02	67.92
Os01t0681200-01	Rice	plasma membrane	67.57	67.67
TraesCS3B01G266100.1	Wheat	golgi	66.52	67.33
HORVU3Hr1G059140.1	Barley	peroxisome	66.52	67.33
TraesCS3D01G237900.1	Wheat	peroxisome	66.52	67.33
PGSC0003DMT400014954	Potato	cytosol	11.71	67.24
Zm00001d043851_P001	Maize	mitochondrion	65.92	66.11
HORVU5Hr1G046950.26	Barley	peroxisome	67.57	66.08
TraesCS3A01G237700.3	Wheat	peroxisome	66.07	65.57
KXG27302	Sorghum	cytosol	5.11	62.96
TraesCS7D01G110700.1	Wheat	peroxisome	61.41	62.92
TraesCS7B01G012700.1	Wheat	peroxisome	60.81	62.31
Zm00001d045295_P001	Maize	extracellular	63.06	62.22
TraesCS7A01G115900.1	Wheat	peroxisome	58.71	61.97
Os01t0655800-01	Rice	plasma membrane	63.06	61.76
Os06t0158000-01	Rice	plasma membrane	56.91	61.63
KRH41306	Soybean	peroxisome	23.27	60.55
KRG94065	Soybean	vacuole	16.07	58.47
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	60.51	56.44
AT1G49430.1	Thale cress	peroxisome	52.1	52.18
AT2G47240.2	Thale cress	peroxisome	47.45	47.88
AT5G27600.1	Thale cress	peroxisome, plastid	38.59	36.71
AT3G05970.1	Thale cress	plastid	38.14	36.23
AT2G47245.1	Thale cress	endoplasmic reticulum	6.76	34.62
AT1G77590.1	Thale cress	peroxisome, plastid	30.93	29.81
AT2G04350.1	Thale cress	peroxisome	30.63	28.33
AT3G23790.1	Thale cress	plastid	24.02	22.16
AT4G14070.1	Thale cress	plastid	23.27	21.32

Protein Annotations

Gene3D:3.40.50.12780	MapMan:50.6.2	EntrezGene:826704	ProteinID:AAC33962.1	ProteinID:AEE82963.1	EMBL:AF503755
InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	ArrayExpress:AT4G11030	EnsemblPlantsGene:AT4G11030	RefSeq:AT4G11030	TAIR:AT4G11030
RefSeq:AT4G11030-TAIR-G	EnsemblPlants:AT4G11030.1	TAIR:AT4G11030.1	EMBL:BT046194	ProteinID:CAB43038.1	ProteinID:CAB81204.1
GO:GO:0000166	GO:GO:0001676	GO:GO:0003674	GO:GO:0003824	GO:GO:0004467	GO:GO:0005488
GO:GO:0005524	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016874	GO:GO:0102391	RefSeq:NP_192841.1	PFAM:PF00501	PO:PO:0007115	PO:PO:0007611
PO:PO:0007616	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0025022	ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9	UniProt:Q9T009
SUPFAM:SSF56801	UniParc:UPI00000AB655	:	:	:	:

Description

LACS5Long chain acyl-CoA synthetase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9T009]

Coordinates

chr4:+:6738068..6742424

Molecular Weight (calculated)

74068.3 Da

IEP (calculated)

6.985

GRAVY (calculated)

-0.154

Length

666 amino acids

Sequence
(BLAST)

001: MTSQKRFIFE VEAAKEATDG NPSVGPVYRS TFAQNGFPNP IDGIQSCWDI FRTAVEKYPN NRMLGRREIS NGKAGKYVWK TYKEVYDIVI KLGNSLRSCG
101: IKEGEKCGIY GINCCEWIIS MEACNAHGLY CVPLYDTLGA GAVEFIISHA EVSIAFVEEK KIPELFKTCP NSTKYMKTVV SFGGVKPEQK EEAEKLGLVI
201: HSWDEFLKLG EGKQYELPIK KPSDICTIMY TSGTTGDPKG VMISNESIVT ITTGVMHFLG NVNASLSEKD VYISYLPLAH VFDRAIEECI IQVGGSIGFW
301: RGDVKLLIED LGELKPSIFC AVPRVLDRVY TGLQQKLSGG GFFKKKVFDV AFSYKFGNMK KGQSHVAASP FCDKLVFNKV KQGLGGNVRI ILSGAAPLAS
401: HIESFLRVVA CCNVLQGYGL TESCAGTFAT FPDELDMLGT VGPPVPNVDI RLESVPEMNY DALGSTPRGE ICIRGKTLFS GYYKREDLTK EVFIDGWLHT
501: GDVGEWQPNG SMKIIDRKKN IFKLAQGEYV AVENLENVYS QVEVIESIWV YGNSFESFLV AIANPAQQTL ERWAVENGVN GDFNSICQNA KAKAFILGEL
601: VKTAKENKLK GFEIIKDVHL EPVAFDMERD LLTPTYKKKR PQLLKYYQNV IHEMYKTTKE SLASGQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.