Factsheet for GSMUA_Achr6P14370_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P32060_001	Banana	peroxisome	78.17	78.17
VIT_02s0025g01410.t01	Wine grape	peroxisome	76.34	75.53
EES01192	Sorghum	peroxisome	73.89	73.89
HORVU3Hr1G059140.1	Barley	peroxisome	73.28	72.95
Zm00001d044016_P001	Maize	mitochondrion	72.67	72.67
Bra013735.1-P	Field mustard	peroxisome	68.86	72.39
TraesCS3D01G237900.1	Wheat	peroxisome	72.52	72.19
TraesCS3B01G266100.1	Wheat	golgi	72.52	72.19
AT4G23850.1	Thale cress	peroxisome	72.82	71.62
CDY47618	Canola	peroxisome	72.82	71.51
KRH27846	Soybean	peroxisome	72.21	71.34
CDY03515	Canola	peroxisome	72.52	71.21
KRH77642	Soybean	endoplasmic reticulum	72.52	70.79
TraesCS3A01G237700.3	Wheat	peroxisome	72.06	70.34
Bra033159.1-P	Field mustard	peroxisome	64.58	70.03
KRH60037	Soybean	peroxisome	70.69	69.62
Bra035259.1-P	Field mustard	peroxisome	70.08	68.92
CDX86825	Canola	peroxisome	70.08	68.92
AT4G11030.1	Thale cress	peroxisome	69.47	68.32
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	68.7	67.67
Os01t0655800-01	Rice	plasma membrane	69.77	67.21
CDX94232	Canola	peroxisome	65.8	65.2
CDY25270	Canola	peroxisome	65.34	64.95
CDY40856	Canola	peroxisome	69.92	62.48
GSMUA_AchrUn_...	Banana	peroxisome	6.56	60.56
KRH41306	Soybean	peroxisome	23.66	60.55
CDY46530	Canola	peroxisome	70.08	58.4
KRG94065	Soybean	vacuole	15.88	56.83
Bra027700.1-P	Field mustard	peroxisome	70.53	55.93
GSMUA_Achr7P27390_001	Banana	peroxisome	55.42	55.34
GSMUA_Achr8P10780_001	Banana	peroxisome	52.21	51.51
CDY64879	Canola	peroxisome	70.53	48.12
GSMUA_Achr8P24080_001	Banana	mitochondrion	37.25	35.88
GSMUA_Achr1P13190_001	Banana	vacuole	32.52	33.18
GSMUA_Achr2P08130_001	Banana	peroxisome, plastid	28.55	32.98
GSMUA_Achr11P...	Banana	endoplasmic reticulum	33.89	31.85
GSMUA_Achr8P30270_001	Banana	peroxisome, plastid	32.98	30.99
GSMUA_AchrUn_...	Banana	peroxisome	5.19	26.98
GSMUA_Achr8P08820_001	Banana	peroxisome	13.59	23.67
GSMUA_Achr8P08810_001	Banana	mitochondrion	4.43	14.65

Protein Annotations

EnsemblPlants:GSMUA_Achr6P14370_001	EnsemblPlants:GSMUA_Achr6T14370_001	EnsemblPlantsGene:GSMUA_Achr6G14370_001	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9
PFAM:PF00501	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	UniParc:UPI00029611B3	UniProt:M0T6Y5
MapMan:50.6.2	:	:	:	:	:

Description

Putative Fatty acyl-CoA synthetase A [Source:GMGC_GENE;Acc:GSMUA_Achr6G14370_001]

Coordinates

chr6:-:9478072..9488837

Molecular Weight (calculated)

72905.0 Da

IEP (calculated)

5.910

GRAVY (calculated)

-0.086

Length

655 amino acids

Sequence
(BLAST)

001: MKYLVEVEKG REGDGAGPSV GPAYRNVLAK DGFPSPAPGL ETCWDVFRMS VERNPDNRML GRREIVDGKA GEYVWLTYKE AYDIVIELGA SIRSRGVGQG
101: GRCGIYGVNC PEWIMTMEAC NAHGIYCVPL YDTLGAGAIE FIICHAEIEI VFVEEKKIME VLKTFPNTVK YLRTLVSFGK VTTEQKEEVE KFGLTIYSWN
201: DFLLLGNNEQ FDLPVNKKSD ICTIMYTSGT TGDPKGVMVS NDSIVTFIAG ANCLLGNAKA ELHDNDVYLS YLPLAHMFDR VIEELFILHG ASIGFWRGDI
301: KLLVEDLGAL KPTIFCAVPR VLDRIYSGLQ NKISSGGFLK KILFNFAYKS KLSNMSKGQK HEEAAPIFDK IVFSKVKQGL GGNVRIILSG AAPLATHVET
401: FLRVVSCAHV IQGYGLTETC AGTFVSVPNE FSMLGTVGPP VPNVDVRLES VPEMGYDALS TTPRGEVCIR GSTLFSGYYK REDLTKEVMI DGWFHTGDIG
501: EWQPDGSLKI IDRKKNIFKL SQGEYVAVEN LESIYGLVPT IDSIWIYGNS FESFLVAVVN PNQQALERWA EEKGVTGDFA ALCENSKAKE YILEEITKVA
601: KSKKLKGFEI IRALHLEPIP FDMDRDLLTP TYKKKRPQML KYYQSVINSL YESAK

Best Arabidopsis Sequence Match ( AT4G23850.1 )
(BLAST)

001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG

Arabidopsis Description

LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.