Factsheet for GSMUA_AchrUn_randomP24860_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P08130_001	Banana	peroxisome, plastid	26.19	5.82
GSMUA_Achr6P14370_001	Banana	peroxisome	26.98	5.19
EES15543	Sorghum	peroxisome	26.98	4.99
GSMUA_Achr1P13190_001	Banana	vacuole	25.4	4.98
Os11t0147000-01	Rice	peroxisome	27.78	4.94
Zm00001d052485_P001	Maize	mitochondrion, peroxisome	26.98	4.89
GSMUA_Achr8P30270_001	Banana	peroxisome, plastid	26.98	4.88
GSMUA_Achr11P...	Banana	endoplasmic reticulum	26.98	4.88
TraesCS5A01G133200.2	Wheat	peroxisome	26.98	4.84
TraesCS5D01G141300.1	Wheat	peroxisome	26.98	4.84
TraesCS5B01G131800.3	Wheat	peroxisome	26.98	4.84
GSMUA_Achr8P10780_001	Banana	peroxisome	25.4	4.82
Os12t0143900-01	Rice	peroxisome	26.98	4.81
Zm00001d023238_P002	Maize	plasma membrane	26.19	4.78
HORVU5Hr1G040740.17	Barley	peroxisome	26.98	4.76
KXG27718	Sorghum	peroxisome	26.19	4.73
GSMUA_Achr8P24080_001	Banana	mitochondrion	25.4	4.71
TraesCS4D01G128700.3	Wheat	mitochondrion	25.4	4.6
TraesCS4B01G133700.3	Wheat	peroxisome	25.4	4.6
TraesCS4A01G184900.2	Wheat	peroxisome	25.4	4.6
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	24.6	4.45
KRG91264	Soybean	peroxisome	24.6	4.44
GSMUA_Achr3P32060_001	Banana	peroxisome	23.02	4.43
VIT_05s0020g03080.t01	Wine grape	peroxisome	23.81	4.3
HORVU4Hr1G025820.9	Barley	peroxisome, plastid	25.4	4.27
GSMUA_Achr7P27390_001	Banana	peroxisome	21.43	4.12
KRH13185	Soybean	cytosol	14.29	2.88
GSMUA_Achr8P08820_001	Banana	peroxisome	1.59	0.53
GSMUA_Achr8P08810_001	Banana	mitochondrion	0.79	0.51
CDY65251	Canola	peroxisome	0.79	0.43
GSMUA_AchrUn_...	Banana	peroxisome	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP24860_001	EnsemblPlants:GSMUA_AchrUn_randomT24860_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG24860_001	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43813	PANTHER:PTHR43813:SF2
PFAM:PF00501	ScanProsite:PS00455	SUPFAM:SSF56801	UniParc:UPI00029507CA	UniProt:M0UC44	MapMan:35.1

Description

Putative Fatty acyl-CoA synthetase B [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG24860_001]

Coordinates

chrchrUn_random:+:123585718..123587809

Molecular Weight (calculated)

14594.6 Da

IEP (calculated)

5.979

GRAVY (calculated)

-0.158

Length

126 amino acids

Sequence
(BLAST)

001: MPIYEYKDIV ELGQQSRHAL LHSWPTGQKY VYEAINPEDV ATLMYTSGTS GIPKGVMLTH QNLLHQIKNL WDIVPAEAGD RFLSMLPTWH AYERAAEYFI
101: FTYGIEQVYT NIKRLKVEFC ILTPID

Best Arabidopsis Sequence Match ( AT3G23790.1 )
(BLAST)

001: MASTSLGASI LVSHCSSAPE FQVSGMRLVF GYKAFGCRTS RRGFRVRCES KIQEKELRRC SPFLERLSLP REAALSSNEW KSVPDIWRSS VEKYGDRVAV
101: VDPYHDPPST FTYRQLEQEI LDFVEGLRVV GVKADEKIAL FADNSCRWLV ADQGIMATGA VNVVRGSRSS VEELLQIYCH SESVALVVDN PEFFNRIAES
201: FSYKAAPKFV ILLWGEKSSL VTAGRHTPVY SYNEIKKFGQ ERRAKFARSN DSGKYEYEYI DPDDIATIMY TSGTTGNPKG VMLTHQNLLH QIRNLSDFVP
301: AEAGERFLSM LPSWHAYERA CEYFIFTCGV EQKYTSIRFL KDDLKRYQPH YLISVPLVYE TLYSGIQKQI SASSPARKFL ALTLIKVSLA YTEMKRVYEG
401: LCLTKNQKPP MYIVSLVDWL WARVVAFFLW PLHMLAEKLV HRKIRSSIGI TKAGVSGGGS LPMHVDKFFE AIGVNVQNGY GLTETSPVVS ARRLRCNVLG
501: SVGHPIKDTE FKIVDHETGT VLPPGSKGIV KVRGPPVMKG YYKNPLATKQ VIDDDGWFNT GDMGWITPQH STGRSRSCGG VIVLEGRAKD TIVLSTGENV
601: EPLEIEEAAM RSNLIQQIVV IGQDQRRLGA IVIPNKEAAE GAAKQKISPV DSEVNELSKE TITSMVYEEL RKWTSQCSFQ VGPVLIVDEP FTIDNGLMTP
701: TMKIRRDKVV DQYKNEIERL YK

Arabidopsis Description

AAE16Probable acyl-activating enzyme 16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LK39]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.