CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	53.28	47.84
KRG91264	Soybean	peroxisome	53.28	47.71
VIT_05s0020g03080.t01	Wine grape	peroxisome	47.04	42.18
CDY27725	Canola	plastid	42.88	39.01
CDY05217	Canola	plastid	42.72	38.86
AT3G05970.1	Thale cress	plastid	43.36	38.66
CDX74115	Canola	plastid	42.72	38.36
Bra001177.1-P	Field mustard	plastid	42.56	38.22
Zm00001d052485_P001	Maize	mitochondrion, peroxisome	42.56	38.22
CDY49993	Canola	mitochondrion	42.56	38.22
Os12t0143900-01	Rice	peroxisome	42.88	37.91
KXG27718	Sorghum	peroxisome	42.24	37.88
Bra020793.1-P	Field mustard	plastid	38.08	37.84
Zm00001d023238_P002	Maize	plasma membrane	41.76	37.77
EES15543	Sorghum	peroxisome	41.12	37.68
TraesCS5B01G131800.3	Wheat	peroxisome	41.92	37.32
TraesCS4D01G128700.3	Wheat	mitochondrion	41.44	37.21
TraesCS4A01G184900.2	Wheat	peroxisome	41.44	37.21
TraesCS4B01G133700.3	Wheat	peroxisome	41.28	37.07
TraesCS5A01G133200.2	Wheat	peroxisome	41.6	37.04
TraesCS5D01G141300.1	Wheat	peroxisome	41.44	36.89
Os11t0147000-01	Rice	peroxisome	41.44	36.53
CDX92843	Canola	peroxisome	12.48	36.45
HORVU5Hr1G040740.17	Barley	peroxisome	41.28	36.08
HORVU4Hr1G025820.9	Barley	peroxisome, plastid	40.8	34.0
PGSC0003DMT400063438	Potato	peroxisome	4.32	29.35
CDY65251	Canola	peroxisome	10.4	27.78
KRH49531	Soybean	peroxisome	23.2	21.97
KRH41306	Soybean	peroxisome	8.96	21.88
KRG94065	Soybean	vacuole	6.4	21.86
KRG89197	Soybean	peroxisome	23.04	21.82
KRH31765	Soybean	peroxisome	23.04	21.82
KRH69184	Soybean	peroxisome	22.88	21.67
KRH29538	Soybean	peroxisome	22.56	21.49
KRH24533	Soybean	peroxisome	22.24	21.19
KRG96554	Soybean	peroxisome	22.08	20.85
KRH68292	Soybean	endoplasmic reticulum	21.92	20.69
KRH60037	Soybean	peroxisome	21.44	20.15
KRH27846	Soybean	peroxisome	20.8	19.61
KRH77642	Soybean	endoplasmic reticulum	20.96	19.52
KRH53234	Soybean	mitochondrion	20.16	18.16
KRG89997	Soybean	endoplasmic reticulum	19.2	17.8
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	19.84	17.1
KRH16338	Soybean	plastid, vacuole	17.6	17.0
KRH18736	Soybean	peroxisome, plastid	18.88	16.95
KRH17725	Soybean	peroxisome	19.52	16.83
KRH48841	Soybean	peroxisome	5.44	15.53
GSMUA_AchrUn_...	Banana	peroxisome	2.88	14.29
KRH66241	Soybean	peroxisome	7.84	13.92
KRH31560	Soybean	plastid	15.2	13.19
KRH58837	Soybean	plastid	14.72	12.55
KRH57847	Soybean	cytosol	1.12	7.95
KRH26020	Soybean	cytosol	1.12	7.87

Protein Annotations

Gene3D:3.40.50.12780	Gene3D:3.40.50.300	MapMan:35.1	EMBL:ACUP02009668	InterPro:AMP-dep_Synth/Lig	InterPro:Dynamin_central
EnsemblPlantsGene:GLYMA_15G220900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005525
GO:GO:0008150	GO:GO:0008152	InterPro:G_DYNAMIN_dom	InterPro:IPR030381	UniProt:K7MD27	EnsemblPlants:KRH13185
ProteinID:KRH13185	ProteinID:KRH13185.1	PFAM:PF00501	PFAM:PF01031	PFscan:PS51718	PANTHER:PTHR43272
PANTHER:PTHR43272:SF17	SUPFAM:SSF56801	UniParc:UPI000295D43F	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:+:39930037..39932175

Molecular Weight (calculated)

69696.2 Da

IEP (calculated)

5.554

GRAVY (calculated)

-0.034

Length

625 amino acids

Sequence
(BLAST)

001: MEYIKPEENI LLNVFSVSAD FTTCESIWMS QSVDNTGLRT LAVVTNTAKS PEGLLEKVTV DEVNIGLGYV CVRNRIDDEI YEDARVEEQK LFEFHPLLFK
101: IDKSIVGVSV LAQKLVQVQI QAMSTSKMLP EIVKKINEKM ANNMPDLEKL PTNLASVADA MTAFMHIIGL AKEYLRKILL NGEFDESPYD KNMHRAPRSV
201: EVCAESDAEQ GYSVVLLEKL QTGRWNVYRS IRSPLQLVTK FPNHPEISTL HNNFVCSVDT FQDYKYRGTR VRVDGTVREY KWMTYGEVGM PRSAIGSGLI
301: YYGIQKGSSI GLYFINRPEW LIVDHACSAY SFVQVIFCVP QTLKLLLSYL SDIPTVHLIM VVGGMDDRIP SVPSSTGVVQ IPPGTPKGAI STHGNFIASV
401: ARSTRDEKFD PSDVYLSCLP LEYIYVQANQ VMTVHFGIAV EFYQGDSMKL MDDIAALKPT VFCSVPRLYN RIYAGIINAV KTSGVFNKIK KKLRGRVRVM
501: ALGASHLSPD FMEFWKICLE SCVISCIDED DNLVGSPNVA CDIKLVDVPE MNYTSDDQPN PRGEICVRGP IDEDGWLNTG DIGTQGCFSQ RRVLIAIQRG
601: LIPDQAGTSR GPIIFVITYE GTALG

Best Arabidopsis Sequence Match ( AT5G27600.1 )
(BLAST)

001: MEFASPEQRR LETIRSHIDT SPTNDQSSSL FLNATASSAS PFFKEDSYSV VLPEKLDTGK WNVYRSKRSP TKLVSRFPDH PEIGTLHDNF VHAVETYAEN
101: KYLGTRVRSD GTIGEYSWMT YGEAASERQA IGSGLLFHGV NQGDCVGLYF INRPEWLVVD HACAAYSFVS VPLYDTLGPD AVKFVVNHAN LQAIFCVPQT
201: LNILLSFLAE IPSIRLIVVV GGADEHLPSL PRGTGVTIVS YQKLLSQGRS SLHPFSPPKP EDIATICYTS GTTGTPKGVV LTHGNLIANV AGSSVEAEFF
301: PSDVYISYLP LAHIYERANQ IMGVYGGVAV GFYQGDVFKL MDDFAVLRPT IFCSVPRLYN RIYDGITSAV KSSGVVKKRL FEIAYNSKKQ AIINGRTPSA
401: FWDKLVFNKI KEKLGGRVRF MGSGASPLSP DVMDFLRICF GCSVREGYGM TETSCVISAM DDGDNLSGHV GSPNPACEVK LVDVPEMNYT SDDQPYPRGE
501: ICVRGPIIFK GYYKDEEQTR EILDGDGWLH TGDIGLWLPG GRLKIIDRKK NIFKLAQGEY IAPEKIENVY TKCRFVSQCF IHGDSFNSSL VAIVSVDPEV
601: MKDWAASEGI KYEHLGQLCN DPRVRKTVLA EMDDLGREAQ LRGFEFAKAV TLVPEPFTLE NGLLTPTFKI KRPQAKAYFA EAISKMYAEI AASNPIPSKL

Arabidopsis Description

LACS7Long chain acyl-CoA synthetase 7, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8LKS5]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.