Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH57847 | Soybean | cytosol | 95.51 | 96.59 |
KRH48841 | Soybean | peroxisome | 89.89 | 36.53 |
KRG89197 | Soybean | peroxisome | 94.38 | 12.73 |
KRH49531 | Soybean | peroxisome | 87.64 | 11.82 |
KRH24533 | Soybean | peroxisome | 76.4 | 10.37 |
KRH29538 | Soybean | peroxisome | 76.4 | 10.37 |
KRH27846 | Soybean | peroxisome | 46.07 | 6.18 |
KRH60037 | Soybean | peroxisome | 44.94 | 6.02 |
KRH69184 | Soybean | peroxisome | 41.57 | 5.61 |
KRH31765 | Soybean | peroxisome | 40.45 | 5.45 |
KRG96554 | Soybean | peroxisome | 40.45 | 5.44 |
KRH77642 | Soybean | endoplasmic reticulum | 40.45 | 5.37 |
KRH68292 | Soybean | endoplasmic reticulum | 39.33 | 5.29 |
KRH66241 | Soybean | peroxisome | 19.1 | 4.83 |
KRG91264 | Soybean | peroxisome | 37.08 | 4.73 |
KRH35544 | Soybean | endoplasmic reticulum, mitochondrion | 35.96 | 4.6 |
KRH16338 | Soybean | plastid, vacuole | 25.84 | 3.55 |
KRH18736 | Soybean | peroxisome, plastid | 26.97 | 3.45 |
KRG94065 | Soybean | vacuole | 6.74 | 3.28 |
KRG89997 | Soybean | endoplasmic reticulum | 23.6 | 3.12 |
KRG89995 | Soybean | endoplasmic reticulum, mitochondrion | 24.72 | 3.03 |
KRH53234 | Soybean | mitochondrion | 23.6 | 3.03 |
KRH31560 | Soybean | plastid | 23.6 | 2.92 |
KRH17725 | Soybean | peroxisome | 23.6 | 2.9 |
KRH58837 | Soybean | plastid | 23.6 | 2.86 |
KRH13185 | Soybean | cytosol | 7.87 | 1.12 |
KRH41306 | Soybean | peroxisome | 1.12 | 0.39 |
Protein Annotations
EMBL:ACUP02007432 | EnsemblPlants:KRH26020 | EnsemblPlantsGene:GLYMA_12G146300 | PANTHER:PTHR43272 | PANTHER:PTHR43272:SF4 | ProteinID:KRH26020 |
ProteinID:KRH26020.1 | UniParc:UPI0006EDB65F | UniProt:A0A0R0HI71 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr12:+:20183480..20184533
Molecular Weight (calculated)
10633.9 Da
IEP (calculated)
9.082
GRAVY (calculated)
-0.735
Length
89 amino acids
Sequence
(BLAST)
(BLAST)
1: MEHNLTHDFK SLCDNLKARK HILDELNSTG QKHQLRGFEL LKVIHLEPNP FDIERDLITQ TFKLKRPQFL KYYKDHIDQL YKEAKGAMV
001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA
Arabidopsis Description
LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.