CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
vacuole 3
extracellular 2
endoplasmic reticulum 2
plasma membrane 2
golgi 2
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41306	Soybean	peroxisome	33.88	24.22
KRH27846	Soybean	peroxisome	70.49	19.46
KRH77642	Soybean	endoplasmic reticulum	69.95	19.08
Solyc08g008310.2.1	Tomato	peroxisome	60.11	18.43
Bra033159.1-P	Field mustard	peroxisome	57.92	17.55
Bra013735.1-P	Field mustard	peroxisome	59.02	17.34
VIT_02s0025g01410.t01	Wine grape	peroxisome	60.66	16.77
Solyc08g082280.2.1	Tomato	nucleus, plastid	60.11	16.72
KRH60037	Soybean	peroxisome	60.66	16.69
TraesCS5B01G147300.1	Wheat	peroxisome	59.56	16.47
TraesCS5D01G144200.2	Wheat	peroxisome	59.56	16.34
AT4G23850.1	Thale cress	peroxisome	59.02	16.22
CDY47618	Canola	peroxisome	59.02	16.19
CDY03515	Canola	peroxisome	59.02	16.19
TraesCS5A01G148700.1	Wheat	peroxisome	59.02	16.19
Zm00001d043851_P001	Maize	mitochondrion	58.47	16.11
Os06t0158000-01	Rice	plasma membrane	54.1	16.1
Os01t0681200-01	Rice	plasma membrane	58.47	16.09
CDY25270	Canola	peroxisome	57.92	16.09
AT4G11030.1	Thale cress	peroxisome	58.47	16.07
CDX94232	Canola	peroxisome	57.92	16.04
HORVU5Hr1G046950.26	Barley	peroxisome	59.56	16.01
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	57.92	15.94
CDX86825	Canola	peroxisome	57.92	15.92
Bra035259.1-P	Field mustard	peroxisome	57.92	15.92
GSMUA_Achr6P14370_001	Banana	peroxisome	56.83	15.88
GSMUA_Achr3P32060_001	Banana	peroxisome	56.83	15.88
HORVU3Hr1G059140.1	Barley	peroxisome	56.28	15.65
Zm00001d044016_P001	Maize	mitochondrion	55.74	15.57
TraesCS3D01G237900.1	Wheat	peroxisome	55.74	15.5
TraesCS3B01G266100.1	Wheat	golgi	55.74	15.5
Zm00001d045295_P001	Maize	extracellular	56.83	15.41
TraesCS7B01G012700.1	Wheat	peroxisome	54.1	15.23
TraesCS7D01G110700.1	Wheat	peroxisome	54.1	15.23
TraesCS3A01G237700.3	Wheat	peroxisome	55.19	15.05
Os01t0655800-01	Rice	plasma membrane	54.64	14.71
CDY40856	Canola	peroxisome	57.92	14.46
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	54.1	13.87
TraesCS7A01G115900.1	Wheat	peroxisome	47.54	13.79
CDY46530	Canola	peroxisome	59.02	13.74
Bra027700.1-P	Field mustard	peroxisome	59.56	13.2
KRG89197	Soybean	peroxisome	47.54	13.18
KRH49531	Soybean	peroxisome	47.54	13.18
KRH24533	Soybean	peroxisome	46.99	13.11
KRH29538	Soybean	peroxisome	46.99	13.11
KXG27302	Sorghum	cytosol	3.83	12.96
KRH69184	Soybean	peroxisome	40.98	11.36
KRH31765	Soybean	peroxisome	40.98	11.36
CDY64879	Canola	peroxisome	59.56	11.35
KRH68292	Soybean	endoplasmic reticulum	38.8	10.73
KRG96554	Soybean	peroxisome	37.7	10.42
KRG91264	Soybean	peroxisome	33.33	8.74
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	32.79	8.62
KRH66241	Soybean	peroxisome	16.39	8.52
KRG89997	Soybean	endoplasmic reticulum	28.42	7.72
KRH17725	Soybean	peroxisome	27.32	6.9
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	27.32	6.9
KRH57847	Soybean	cytosol	3.28	6.82
KRH26020	Soybean	cytosol	3.28	6.74
KRH53234	Soybean	mitochondrion	25.14	6.63
KRH18736	Soybean	peroxisome, plastid	24.59	6.47
KRH13185	Soybean	cytosol	21.86	6.4
KRH58837	Soybean	plastid	23.5	5.87
KRH31560	Soybean	plastid	22.4	5.69
KRH16338	Soybean	plastid, vacuole	18.03	5.1
KRH48841	Soybean	peroxisome	4.92	4.11
PGSC0003DMT400014954	Potato	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02011710	EnsemblPlants:KRG94065	EnsemblPlantsGene:GLYMA_19G059400	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9	PFAM:PF00501	ProteinID:KRG94065
ProteinID:KRG94065.1	SUPFAM:SSF56801	UniParc:UPI0006ED7FC7	UniProt:A0A0R0ETA3	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr19:+:11506472..11508623

Molecular Weight (calculated)

21013.7 Da

IEP (calculated)

8.272

GRAVY (calculated)

0.231

Length

183 amino acids

Sequence
(BLAST)

001: MGVKCGIYGA NSAEWIMSMQ IEALFLILNI YSLQRVPLIY EQSVGAIEFI ICHSEVSIAL AEEKKIPEVL LSKPSDVYIS YLPLAHTFFR TIEEIFIWYG
101: ASIGFWRGDV KLLIDDVGEL KPTIFCVVPR VLDRVYSGLT QKISSGGFLK KTLKKDSRIS FYVYYYFQNS KRKTDLNCNY VYV

Best Arabidopsis Sequence Match ( AT4G23850.1 )
(BLAST)

001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG

Arabidopsis Description

LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.