Factsheet for GSMUA_Achr3P32060_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g01410.t01	Wine grape	peroxisome	79.39	78.55
GSMUA_Achr6P14370_001	Banana	peroxisome	78.17	78.17
EES01271	Sorghum	peroxisome	77.25	76.44
Os01t0681200-01	Rice	plasma membrane	77.4	76.24
TraesCS5B01G147300.1	Wheat	peroxisome	76.18	75.38
TraesCS5A01G148700.1	Wheat	peroxisome	76.03	74.66
Zm00001d043851_P001	Maize	mitochondrion	75.57	74.55
TraesCS5D01G144200.2	Wheat	peroxisome	75.88	74.51
HORVU5Hr1G046950.26	Barley	peroxisome	76.49	73.57
KRH77642	Soybean	endoplasmic reticulum	74.66	72.88
KRH27846	Soybean	peroxisome	73.74	72.85
Bra013735.1-P	Field mustard	peroxisome	68.86	72.39
CDY47618	Canola	peroxisome	73.44	72.11
CDY03515	Canola	peroxisome	73.13	71.81
AT4G23850.1	Thale cress	peroxisome	72.37	71.17
Bra033159.1-P	Field mustard	peroxisome	65.5	71.03
KRH60037	Soybean	peroxisome	71.76	70.68
Bra035259.1-P	Field mustard	peroxisome	70.84	69.67
CDX86825	Canola	peroxisome	70.84	69.67
AT4G11030.1	Thale cress	peroxisome	70.08	68.92
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	69.01	67.97
CDY25270	Canola	peroxisome	67.18	66.77
CDX94232	Canola	peroxisome	67.33	66.72
OQU82479	Sorghum	peroxisome	71.76	65.01
CDY40856	Canola	peroxisome	70.38	62.89
KRH41306	Soybean	peroxisome	24.27	62.11
GSMUA_AchrUn_...	Banana	peroxisome	6.41	59.15
CDY46530	Canola	peroxisome	70.69	58.91
GSMUA_Achr7P27390_001	Banana	peroxisome	57.4	57.32
KRG94065	Soybean	vacuole	15.88	56.83
Bra027700.1-P	Field mustard	peroxisome	71.14	56.42
GSMUA_Achr8P10780_001	Banana	peroxisome	51.15	50.45
CDY64879	Canola	peroxisome	71.14	48.54
GSMUA_Achr8P24080_001	Banana	mitochondrion	37.71	36.32
GSMUA_Achr2P08130_001	Banana	peroxisome, plastid	28.24	32.63
GSMUA_Achr1P13190_001	Banana	vacuole	31.6	32.24
GSMUA_Achr11P...	Banana	endoplasmic reticulum	32.82	30.85
GSMUA_Achr8P30270_001	Banana	peroxisome, plastid	32.52	30.56
GSMUA_Achr8P08820_001	Banana	peroxisome	14.5	25.27
GSMUA_AchrUn_...	Banana	peroxisome	4.43	23.02
GSMUA_Achr8P08810_001	Banana	mitochondrion	4.27	14.14

Protein Annotations

EnsemblPlants:GSMUA_Achr3P32060_001	EnsemblPlants:GSMUA_Achr3T32060_001	EnsemblPlantsGene:GSMUA_Achr3G32060_001	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9
PFAM:PF00501	ScanProsite:PS00455	SUPFAM:SSF56801	UniParc:UPI000296B108	UniProt:M0SJM0	MapMan:50.6.2

Description

Putative Fatty acyl-CoA synthetase A [Source:GMGC_GENE;Acc:GSMUA_Achr3G32060_001]

Coordinates

chr3:-:30063853..30075182

Molecular Weight (calculated)

73151.3 Da

IEP (calculated)

6.245

GRAVY (calculated)

-0.128

Length

655 amino acids

Sequence
(BLAST)

001: MKHLLEVEKG REATDGRPSV GPAYRSAFAK DGFPPPIPGV DSCWDVFRLS AERHPGNRML GRREVVDGKA GEYVWITYKE VYDTVIKVGA SIRSRGVDQG
101: GRCGIYGANC PEWVVSMEAC NAHGIYCVPL YDTLGAGAVE FILCHAEVQI AFVEEKKIAE VLKTLQNSSK FLRTIVSFGK VTLEQREAVE KSGLAIFEWD
201: EFLLLGCNNH FDLPVKKKDD ICTIMYTSGT TGDPKGVMIS NNSIITLISG VDRLLHCVNE QLHEDEVYMS YLPLAHIFDR VIEELFIFHG ASIGFWRGDV
301: KLLVEDIGEL KPTIFCAVPR VLDRIYTGLQ TKISSGGMLK QTLFNVSYKY KLHNMMRGSK HDEAATICDK FVFNKVKHGL GGNVRLILSG AAPLATHVEQ
401: FLRVVTCAHV LQGYGLTETC AGTFVSLPND LSMLGTVGPP VPNVDVRLES VPEMGYDALS EVPRGEICIK GNTLFSGYYK REDLTEEVMV DGWFHTGDVG
501: EWQPDGSMKI IDRKKNIFKL SQGEYVAVEN LENIYALVSG IDSIWVYGNS FESFLIAIIN PNKQALEHWA ELTGITGDFA TLCENPKAKE YILGELTKIG
601: KEKKLKGFEL IKAVHLDPEP FDMERDLLTP TYKKKRPQLL KHYQSVIDEL YKSSK

Best Arabidopsis Sequence Match ( AT4G23850.1 )
(BLAST)

001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG

Arabidopsis Description

LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.