Factsheet for TraesCS5D01G144200.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G148700.1	Wheat	peroxisome	98.5	98.5
TraesCS5B01G147300.1	Wheat	peroxisome	97.75	98.49
HORVU5Hr1G046950.26	Barley	peroxisome	97.6	95.59
Os01t0681200-01	Rice	plasma membrane	88.01	88.27
EES01271	Sorghum	peroxisome	85.76	86.4
Zm00001d043851_P001	Maize	mitochondrion	84.86	85.24
GSMUA_Achr3P32060_001	Banana	peroxisome	74.51	75.88
VIT_02s0025g01410.t01	Wine grape	peroxisome	73.01	73.56
TraesCS3D01G237900.1	Wheat	peroxisome	72.41	73.4
OQU82479	Sorghum	peroxisome	78.71	72.61
KRH27846	Soybean	peroxisome	71.51	71.95
KRH77642	Soybean	endoplasmic reticulum	71.81	71.39
Bra033159.1-P	Field mustard	peroxisome	63.87	70.53
Bra013735.1-P	Field mustard	peroxisome	65.07	69.66
KRH60037	Soybean	peroxisome	68.22	68.42
CDY47618	Canola	peroxisome	68.37	68.37
CDY03515	Canola	peroxisome	68.22	68.22
CDX86825	Canola	peroxisome	68.07	68.17
AT4G23850.1	Thale cress	peroxisome	68.07	68.17
AT4G11030.1	Thale cress	peroxisome	67.92	68.02
Bra035259.1-P	Field mustard	peroxisome	67.92	68.02
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	66.57	66.77
TraesCS7D01G110700.1	Wheat	peroxisome	64.47	66.15
CDX94232	Canola	peroxisome	65.22	65.81
CDY25270	Canola	peroxisome	64.77	65.55
CDY40856	Canola	peroxisome	67.92	61.8
KRG94065	Soybean	vacuole	16.34	59.56
TraesCS5D01G420300.1	Wheat	golgi	58.47	58.91
CDY46530	Canola	peroxisome	68.37	58.02
KRH41306	Soybean	peroxisome	21.89	57.03
Bra027700.1-P	Field mustard	peroxisome	68.82	55.57
CDY64879	Canola	peroxisome	68.82	47.81
TraesCS1D01G077600.1	Wheat	golgi	47.53	47.31
TraesCS4D01G128700.3	Wheat	mitochondrion	39.73	38.07
TraesCS5D01G141300.1	Wheat	peroxisome	39.43	37.46
TraesCS4D01G108300.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	33.58	32.14
TraesCS5D01G129800.1	Wheat	golgi	32.23	30.8
TraesCS5D01G174000.1	Wheat	peroxisome	31.78	29.12
TraesCS5D01G533800.3	Wheat	mitochondrion, plastid	23.24	20.97
TraesCS5D01G533700.1	Wheat	plastid	22.34	20.33

Protein Annotations

EnsemblPlants:TraesCS5D01G144200.2	EnsemblPlantsGene:TraesCS5D01G144200	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9	PFAM:PF00501
ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	TIGR:cd05927	MapMan:50.6.2	:

Description

No Description!

Coordinates

chr5D:-:230413532..230421384

Molecular Weight (calculated)

73718.7 Da

IEP (calculated)

6.392

GRAVY (calculated)

-0.193

Length

667 amino acids

Sequence
(BLAST)

001: MAEATRKYLV QVAEGREAAP EEGGAPSAGP VYRCAAGAGG ASPPAVPGLE SCWDIFRLSV EKYPGNPMMG RREIMDGKAG KYTWVTYKEV YDTVIKVGAS
101: IRSCGINKGG RCGIYGGNSP EWVVSMQACN AHGIYCVPLY DTLGAGAIEF ILCHAEVEIA FVEEKKIGEV LKTLPNATKF LKTIVSFGKV SPDQKEKVEQ
201: NGLSIYSWSE FVLKGDGAEE KYELPPKEKA DICTIMYTSG TTGDPKGVLI SNKSIITIVS AVDEFLRNSN EQIREDDVYI SYLPLAHIFD RVIEEVFIHH
301: GASIGFWRGD VKLLVEDIGE LKPTIFCAVP RVLDRIYGGL QDKVSTGGFL KKTLFNVAYK YKQGNMIKGS KHEDAASIFD KLVFTKVKRG LGGRVRVILS
401: GAAPLSNHVE EFLRVVTCSH VLQGYGLTET CAGSFVSLPN NMSMLGTVGP PVPYVEVHLE SVPEMGYDAL SKESPRGEIC IRGDTLFSGY YKREDLTKEV
501: LVDGWFHTGD IGEWQHDGSM KIIDRKKNIF KLSQGEYVAV ENLENIFGQA PNVDSIWVYG NSFESCLVAV INPNKQGLER WAESNGVSGD FASICGDAKA
601: KEFILEELSK TGKDKKLKGF EMIRAVHLEP VLFDMERDLI TPTYKKKRPQ LLKYYQGIID EMYKSMK

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.