CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41306	Soybean	peroxisome	30.98	80.47
KRH77642	Soybean	endoplasmic reticulum	80.6	79.88
KRH27846	Soybean	peroxisome	79.55	79.79
VIT_02s0025g01410.t01	Wine grape	peroxisome	75.04	75.38
Solyc08g082280.2.1	Tomato	nucleus, plastid	73.83	74.62
Solyc08g008310.2.1	Tomato	peroxisome	66.02	73.53
Bra013735.1-P	Field mustard	peroxisome	67.67	72.23
GSMUA_Achr3P32060_001	Banana	peroxisome	70.68	71.76
CDY47618	Canola	peroxisome	71.73	71.51
CDY03515	Canola	peroxisome	71.58	71.36
AT4G23850.1	Thale cress	peroxisome	70.98	70.87
GSMUA_Achr6P14370_001	Banana	peroxisome	69.62	70.69
AT4G11030.1	Thale cress	peroxisome	69.92	69.82
Zm00001d043851_P001	Maize	mitochondrion	69.62	69.73
Zm00001d044016_P001	Maize	mitochondrion	68.57	69.62
Bra033159.1-P	Field mustard	peroxisome	63.16	69.54
Bra035259.1-P	Field mustard	peroxisome	69.62	69.52
CDX86825	Canola	peroxisome	69.62	69.52
Os01t0681200-01	Rice	plasma membrane	69.32	69.32
HORVU3Hr1G059140.1	Barley	peroxisome	68.57	69.3
TraesCS3D01G237900.1	Wheat	peroxisome	68.42	69.15
TraesCS3B01G266100.1	Wheat	golgi	68.42	69.15
TraesCS5B01G147300.1	Wheat	peroxisome	67.97	68.28
TraesCS5D01G144200.2	Wheat	peroxisome	68.42	68.22
TraesCS5A01G148700.1	Wheat	peroxisome	68.27	68.07
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	67.97	67.97
HORVU5Hr1G046950.26	Barley	peroxisome	68.42	66.81
TraesCS3A01G237700.3	Wheat	peroxisome	67.37	66.77
KXG27302	Sorghum	cytosol	5.41	66.67
CDY25270	Canola	peroxisome	65.41	66.01
CDX94232	Canola	peroxisome	65.26	65.66
Os01t0655800-01	Rice	plasma membrane	65.26	63.82
Os06t0158000-01	Rice	plasma membrane	58.95	63.74
TraesCS7D01G110700.1	Wheat	peroxisome	62.26	63.69
TraesCS7B01G012700.1	Wheat	peroxisome	61.95	63.38
CDY40856	Canola	peroxisome	69.47	63.03
Zm00001d045295_P001	Maize	extracellular	63.76	62.81
TraesCS7A01G115900.1	Wheat	peroxisome	59.55	62.76
PGSC0003DMT400014954	Potato	cytosol	10.83	62.07
KRG94065	Soybean	vacuole	16.69	60.66
KRH48841	Soybean	peroxisome	19.85	60.27
CDY46530	Canola	peroxisome	68.72	58.14
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	62.11	57.84
KRG89197	Soybean	peroxisome	55.64	56.06
KRH49531	Soybean	peroxisome	55.49	55.91
Bra027700.1-P	Field mustard	peroxisome	69.17	55.69
KRH24533	Soybean	peroxisome	54.74	55.49
KRH29538	Soybean	peroxisome	54.29	55.03
KRH31765	Soybean	peroxisome	51.28	51.67
KRH69184	Soybean	peroxisome	51.28	51.67
KRH68292	Soybean	endoplasmic reticulum	50.38	50.6
KRG96554	Soybean	peroxisome	50.08	50.3
CDY64879	Canola	peroxisome	69.17	47.92
KRH57847	Soybean	cytosol	6.17	46.59
KRH26020	Soybean	cytosol	6.02	44.94
KRH66241	Soybean	peroxisome	23.16	43.75
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	38.2	36.49
KRG91264	Soybean	peroxisome	38.05	36.25
KRG89997	Soybean	endoplasmic reticulum	32.78	32.34
KRH53234	Soybean	mitochondrion	32.33	30.98
KRH17725	Soybean	peroxisome	33.23	30.48
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	33.08	30.34
KRH18736	Soybean	peroxisome, plastid	31.73	30.32
KRH16338	Soybean	plastid, vacuole	28.12	28.9
KRH31560	Soybean	plastid	24.36	22.5
KRH13185	Soybean	cytosol	20.15	21.44
KRH58837	Soybean	plastid	23.31	21.15

Protein Annotations

EMBL:ACUP02003347	EnsemblPlants:KRH60037	EnsemblPlantsGene:GLYMA_05G216600	EntrezGene:100811306	Gene3D:3.40.50.12780	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272
PANTHER:PTHR43272:SF9	PFAM:PF00501	ProteinID:KRH60037	ProteinID:KRH60037.1	ScanProsite:PS00455	SUPFAM:SSF56801
UniParc:UPI000233982D	UniProt:I1K699	MapMan:50.6.2	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:39686415..39694722

Molecular Weight (calculated)

74675.1 Da

IEP (calculated)

6.450

GRAVY (calculated)

-0.204

Length

665 amino acids

Sequence
(BLAST)

001: MAEKRFIVEV EKATEGGEGR PSMGPVYRSI FADDLLPPPI EGLNTCWDIF RMSVEKYPAR KMLGVREIVN GNPGKYKWQT YKEVYDLVMN VGNSIRACGY
101: GEGVKCGIYG ANCPEWIVSM EACNAHGLYC VPLYDTLGAG AVEFIICHAE VSMAFVEEKK IPELLKTFPN AGKYLKTLVS FGKVTPEQKQ EVEEFGLAMY
201: SWDEFLQVGH NQSFDLPVKK KSDVCTIMYT SGTTGDPKGV LISNESIITL LAGIQQLLKS CNEKLNEKDV YISYLPLAHI FDRVIEEAMI MHGASIGFWR
301: GDVRLLLEDI GELRPTIFVA VPRVLDRVYN GLTQKISSGS FMKQTMFNFA YSYKLHNMTK GQNHNEASPL FDRIVFNKVK QGLGGNVRII LSGAAPLSRH
401: VEGFLRVVTC AHILQGYGLT ETCAGTFVSL PNEKDMLGTV GPPVPYVDVR LESIPEMGYD ALATTPRGEI CVRGSTVFTG YYKREDLTKE VMIDGWFHTG
501: DIGEWLPNGT MKIIDRKKNI FKLSQGEYVA VENLENIYVQ ASSVESIWVY GNSFESYLVA IVNPSKQALD KWAEENDITA DFNSLCEDSR TKSYIIGELT
601: KIAKDKKLKG FEFIKAVHLD PVPFDMERGL MTPTFKKKRP ELLKYYQNTI DNMYKTQNTQ NKSSA

Best Arabidopsis Sequence Match ( AT4G23850.1 )
(BLAST)

001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG

Arabidopsis Description

LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.