CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68292	Soybean	endoplasmic reticulum	95.77	95.77
KRH69184	Soybean	peroxisome	82.63	82.88
KRH31765	Soybean	peroxisome	82.48	82.73
VIT_07s0005g01790.t01	Wine grape	peroxisome	75.68	75.68
PGSC0003DMT400023374	Potato	peroxisome	71.45	71.56
KRH66241	Soybean	peroxisome	37.76	71.02
AT2G47240.2	Thale cress	peroxisome	68.43	68.64
CDY51419	Canola	peroxisome	68.28	68.48
Bra021392.1-P	Field mustard	peroxisome	68.28	68.48
CDY27501	Canola	peroxisome	67.82	68.03
CDY72011	Canola	peroxisome	21.3	66.82
GSMUA_Achr8P10780_001	Banana	peroxisome	66.62	66.42
CDY69216	Canola	peroxisome	41.24	66.26
CDX80092	Canola	mitochondrion, peroxisome	29.15	65.87
CDY68722	Canola	peroxisome	28.1	65.49
TraesCS1B01G093600.1	Wheat	peroxisome	65.71	64.93
Os05t0132100-02	Rice	plasma membrane	65.56	64.87
Bra004467.1-P	Field mustard	peroxisome	68.13	64.71
TraesCS1A01G075000.1	Wheat	golgi	65.26	64.48
TraesCS1D01G077600.1	Wheat	golgi	65.11	64.33
CDX80093	Canola	peroxisome	41.54	63.81
CDY37793	Canola	peroxisome	41.54	63.81
Zm00001d024723_P001	Maize	peroxisome	64.2	63.43
KXG21217	Sorghum	peroxisome	64.05	63.28
CDY71490	Canola	extracellular, peroxisome	14.65	62.99
CDX95713	Canola	peroxisome	60.88	58.83
HORVU1Hr1G016200.16	Barley	peroxisome	65.11	55.26
Zm00001d010943_P001	Maize	peroxisome	11.48	53.9
KRH48841	Soybean	peroxisome	17.07	51.6
KRH60037	Soybean	peroxisome	50.3	50.08
KRH27846	Soybean	peroxisome	49.85	49.77
KRH77642	Soybean	endoplasmic reticulum	49.24	48.58
KRG89197	Soybean	peroxisome	47.89	48.03
KRH49531	Soybean	peroxisome	47.43	47.58
KRH24533	Soybean	peroxisome	46.83	47.26
KRH29538	Soybean	peroxisome	46.83	47.26
KRH41306	Soybean	peroxisome	15.86	41.02
KRH57847	Soybean	cytosol	5.44	40.91
KRH26020	Soybean	cytosol	5.44	40.45
KRG94065	Soybean	vacuole	10.42	37.7
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	36.25	34.48
KRG91264	Soybean	peroxisome	36.25	34.38
KRH18736	Soybean	peroxisome, plastid	32.33	30.75
KRH53234	Soybean	mitochondrion	31.87	30.4
KRG89997	Soybean	endoplasmic reticulum	29.91	29.38
KRH16338	Soybean	plastid, vacuole	28.7	29.37
KRH17725	Soybean	peroxisome	30.66	28.0
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	30.51	27.86
KRH58837	Soybean	plastid	25.23	22.78
KRH31560	Soybean	plastid	24.77	22.78
KRH13185	Soybean	cytosol	20.85	22.08

Protein Annotations

EMBL:ACUP02012157	EnsemblPlants:KRG96554	EnsemblPlantsGene:GLYMA_19G218300	EntrezGene:100818394	Gene3D:3.40.50.12780	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272
PANTHER:PTHR43272:SF6	PFAM:PF00501	ProteinID:KRG96554	ProteinID:KRG96554.1	ProteinID:KRG96555.1	ScanProsite:PS00455
SEG:seg	SUPFAM:SSF56801	UniParc:UPI000233E484	UniProt:I1NBE7	MapMan:50.6.2	:

Description

hypothetical protein

Coordinates

chr19:-:47093379..47100155

Molecular Weight (calculated)

74647.4 Da

IEP (calculated)

6.934

GRAVY (calculated)

-0.231

Length

662 amino acids

Sequence
(BLAST)

001: MKGFAVKVEE GREGTNGELS IGPVYRNLLS KNEFPPLDPD LSTAWDIFSM AVKKYRKNRM LGWREFVDGK IGPYVWKTYE EVYDEVLHIG SALRASGAEP
101: GSRIGIYGAN CPQWIVAMEA CCAHNLICVP LYDTLGPGAV NFIIDHGELD FVFVQDKKVI HLLNPDCKSA QRLKAMVSFT SLTEEEKDKA IAIGIKPYSW
201: EEFLHMGKEN PSNISPPQPN SICTIMYTSG TSGDPKGVVL THENITVFVR GMDLFMEQFE DKMTVEDVYL SFLPLAHILD RTIEEYFFHK GASVGYYHGD
301: LNALRDDLME LKPTLFAGVP RVFEKVHEGI KKAVEELNPV RRRVFGMLYK HKLGWMNKGY KHCNASPLAD LLAFRKVKAR LGGRVRLIIS GGAPLSSEVE
401: EFLRVTSCAF VCQGYGLTET CGSTTLAYPD EMCMLGTVGP VSIYNEMRLE EVPEMGYNPL GSPSCGEICL RGKTVFTGYY KNPELTREAI KDGWFHTGDI
501: AEVQLNGAVK IIDRKKNLIK LSQGEYIALE HLENVYGITP IVEDVWVYGN SFKSALVAVV VPNEETTKKW AFSNGHMAPF SKLCSLDQLK KHVLSELKMT
601: AERNKLKGFE YIKGVILDPQ PFDMERDLVT STMKKRRNNM LKYYQVEIDE LYRSLRGDKP KI

Best Arabidopsis Sequence Match ( AT2G47240.3 )
(BLAST)

001: MKSFAAKVEE GVKGIDGKPS VGPVYRNLLS EKGFPPIDSE ITTAWDIFSK SVEKFPDNNM LGWRRIVDEK VGPYMWKTYK EVYEEVLQIG SALRAAGAEP
101: GSRVGIYGVN CPQWIIAMEA CAAHTLICVP LYDTLGSGAV DYIVEHAEID FVFVQDTKIK GLLEPDCKCA KRLKAIVSFT NVSDELSHKA SEIGVKTYSW
201: IDFLHMGREK PEDTNPPKAF NICTIMYTSG TSGDPKGVVL THQAVATFVV GMDLYMDQFE DKMTHDDVYL SFLPLAHILD RMNEEYFFRK GASVGYYHGN
301: LNVLRDDIQE LKPTYLAGVP RVFERIHEGI QKALQELNPR RRFIFNALYK HKLAWLNRGY SHSKASPMAD FIAFRKIRDK LGGRIRLLVS GGAPLSPEIE
401: EFLRVTCCCF VVQGYGLTET LGGTALGFPD EMCMLGTVGI PAVYNEIRLE EVSEMGYDPL GENPAGEICI RGQCMFSGYY KNPELTEEVM KDGWFHTGDI
501: GEILPNGVLK IIDRKKNLIK LSQGEYVALE HLENIFGQNS VVQDIWVYGD SFKSMLVAVV VPNPETVNRW AKDLGFTKPF EELCSFPELK EHIISELKST
601: AEKNKLRKFE YIKAVTVETK PFDVERDLVT ATLKNRRNNL LKYYQVQIDE MYRKLASKKI

Arabidopsis Description

LACS1Long chain acyl-CoA synthetase 1 [Source:UniProtKB/Swiss-Prot;Acc:O22898]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.