CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29538	Soybean	peroxisome	96.04	96.04
KRH48841	Soybean	peroxisome	28.51	85.39
KRH49531	Soybean	peroxisome	83.08	82.58
KRG89197	Soybean	peroxisome	82.77	82.27
KRH57847	Soybean	cytosol	10.67	79.55
KRH26020	Soybean	cytosol	10.37	76.4
VIT_03s0063g01880.t01	Wine grape	peroxisome	76.52	76.18
PGSC0003DMT400064817	Potato	peroxisome	73.32	72.99
Solyc01g109180.2.1	Tomato	nucleus	72.87	72.53
GSMUA_Achr7P27390_001	Banana	peroxisome	69.05	69.05
CDY59237	Canola	peroxisome	68.29	67.27
Bra032284.1-P	Field mustard	peroxisome	68.14	67.12
CDY29350	Canola	peroxisome	68.14	67.12
Os11t0558300-01	Rice	peroxisome	67.23	66.72
AT1G49430.1	Thale cress	peroxisome	67.53	66.62
KXG28707	Sorghum	peroxisome	66.01	65.11
TraesCS5D01G420300.1	Wheat	golgi	64.79	64.2
TraesCS5A01G411500.2	Wheat	golgi	64.79	64.01
TraesCS5B01G415100.1	Wheat	peroxisome	64.48	63.9
Zm00001d053127_P005	Maize	mitochondrion	64.33	63.55
HORVU5Hr1G099350.15	Barley	peroxisome	64.63	63.47
KRH27846	Soybean	peroxisome	55.79	55.2
KRH77642	Soybean	endoplasmic reticulum	56.4	55.14
KRH60037	Soybean	peroxisome	55.49	54.74
KRH41306	Soybean	peroxisome	19.05	48.83
KRH69184	Soybean	peroxisome	48.17	47.88
KRH31765	Soybean	peroxisome	47.71	47.42
KRG94065	Soybean	vacuole	13.11	46.99
KRG96554	Soybean	peroxisome	47.26	46.83
KRH68292	Soybean	endoplasmic reticulum	46.8	46.37
KRH66241	Soybean	peroxisome	22.41	41.76
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	39.63	37.36
KRG91264	Soybean	peroxisome	39.48	37.11
KRG89997	Soybean	endoplasmic reticulum	31.1	30.27
KRH53234	Soybean	mitochondrion	30.79	29.11
KRH18736	Soybean	peroxisome, plastid	30.79	29.02
KRH17725	Soybean	peroxisome	31.71	28.69
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	31.1	28.14
KRH16338	Soybean	plastid, vacuole	27.59	27.98
KRH13185	Soybean	cytosol	21.19	22.24
KRH31560	Soybean	plastid	24.39	22.22
KRH58837	Soybean	plastid	24.24	21.69

Protein Annotations

EntrezGene:100790068	Gene3D:3.40.50.12780	MapMan:50.6.2	EMBL:ACUP02007178	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:GLYMA_12G047400	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
UniProt:I1LQ81	EnsemblPlants:KRH24533	ProteinID:KRH24533	ProteinID:KRH24533.1	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF4	SUPFAM:SSF56801	UniParc:UPI000233D75E	SEG:seg

Description

hypothetical protein

Coordinates

chr12:+:3430200..3438358

Molecular Weight (calculated)

73847.5 Da

IEP (calculated)

5.581

GRAVY (calculated)

-0.229

Length

656 amino acids

Sequence
(BLAST)

001: MPEVYTVKVE EARPATHEKP SAGPVYRCIY AKDALTVLPS HFESPWEFFR DTTTRCPSNP MLGRRQKSDS KVGPYEWITY QEAYDAAIRM GSAMRSRDVN
101: PGDRCGIYGS NCPEWIIAME ACNSYAVTYV PLYDTLGPNA VEFIINHAEV SIAFVQDNKF PSVLSCLDRC SSLKTVVSFG NVSTTQKKEA EELGASCFSW
201: EEFLQLGNMD LDLPLKNKTN ICTIMYTSGT TGEPKGVIIK NEAFMTQVLS IDQILNLTDR VGTEDDVYFS FLPLAHVYDQ IMETYCIYKG SSIGFWQGDV
301: RFLMEDIQAL KPTLFCAVPR VYDRVYAGIS SKISSGGALQ STLFQYAYNY KLGYLEKGLP QDKAAPLFDK LVFDKIKQAL GGRVRLLLSG AAPLPRHVEE
401: FLRVTFGATM SQGYGLTESC GGCFTAISNV FSMMGTIGVP MTTIESRLES VPEMGYDALS SEARGEICLR GNTLFSGYHK HQDLTEEVMV DGWFHTGDIG
501: EWQPNGAMKI IDRKKNIFKL SQGEYVAVEN IENKYLQCPL ITSIWVYGNS FESFLVAVVV PERKALEDWA VKHNSTDDFK SLCENPKARK YILDELNNTG
601: QKHQLRGFEL LKAVHLEPIP FDMERDLITP TFKLKRPQLL KQYKECIDQL YKEAKA

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.