Factsheet for HORVU5Hr1G099350.15

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G420300.1	Wheat	golgi	96.56	97.43
TraesCS5A01G411500.2	Wheat	golgi	96.56	97.14
TraesCS5B01G415100.1	Wheat	peroxisome	95.81	96.68
Os11t0558300-01	Rice	peroxisome	84.58	85.48
KXG28707	Sorghum	peroxisome	83.83	84.21
Zm00001d053127_P005	Maize	mitochondrion	82.04	82.53
KRH48841	Soybean	peroxisome	23.2	70.78
GSMUA_Achr7P27390_001	Banana	peroxisome	68.56	69.82
PGSC0003DMT400064817	Potato	peroxisome	67.96	68.89
Solyc01g109180.2.1	Tomato	nucleus	67.81	68.74
VIT_03s0063g01880.t01	Wine grape	peroxisome	64.67	65.55
KRH49531	Soybean	peroxisome	64.37	65.15
KRG89197	Soybean	peroxisome	64.22	65.0
KRH29538	Soybean	peroxisome	63.47	64.63
KRH24533	Soybean	peroxisome	63.47	64.63
AT1G49430.1	Thale cress	peroxisome	61.68	61.95
CDY59237	Canola	peroxisome	60.93	61.11
CDY29350	Canola	peroxisome	60.93	61.11
Bra032284.1-P	Field mustard	peroxisome	60.93	61.11
HORVU5Hr1G046950.26	Barley	peroxisome	59.28	58.15
HORVU3Hr1G059140.1	Barley	peroxisome	56.74	57.6
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	52.1	48.74
HORVU1Hr1G027510.1	Barley	cytosol	3.74	46.3
HORVU1Hr1G016200.16	Barley	peroxisome	46.86	40.13
HORVU5Hr1G040740.17	Barley	peroxisome	37.57	35.1
HORVU4Hr1G025820.9	Barley	peroxisome, plastid	37.87	33.73
AT2G47245.1	Thale cress	endoplasmic reticulum	6.44	33.08
HORVU5Hr1G036460.1	Barley	endoplasmic reticulum	31.59	30.23
HORVU4Hr1G019780.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	30.99	29.7
HORVU5Hr1G052100.13	Barley	peroxisome	32.34	29.39
HORVU5Hr1G120850.1	Barley	plastid	23.35	22.77
HORVU1Hr1G032500.2	Barley	peroxisome	3.89	16.46

Protein Annotations

EnsemblPlants:HORVU5Hr1G099350.15	EnsemblPlantsGene:HORVU5Hr1G099350	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:AMP-bd_C	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF4
PFAM:PF00501	PFAM:PF13193	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801	UniParc:UPI000B46BD68
UniProt:A0A287SH90	MapMan:50.6.2	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:610012052..610016866

Molecular Weight (calculated)

74470.9 Da

IEP (calculated)

7.437

GRAVY (calculated)

-0.163

Length

668 amino acids

Sequence
(BLAST)

001: MENTVYTVKV GEGTPAGGGR PAAGPVYRSI YAKDGLMQLP QEIHSPWDFF SGAVKKYPKN RMLGRRQVSD GKAGDYVWQT YEQVYQKVIQ IGAAIRGFGV
101: KPGAHCAIYG SNCPEWVMAM QACNSQGICY VPLYDTLGQN AVQFILDHAE ISIAFMQESK IKSIAAILPK CTAHIKAIVS FGDVPIELKR EVEQLGVSCF
201: SWEEFSTMGE EIQELPKKQK DDICTIMYTS GTTGEPKGVI ITNRAIVAGV TTTEHLLKLT DKVVDEYDSY FSYLPLAHIF DQVIGNYCIS KGASIGFWQG
301: DIRYLMEDVQ VMKPTIFCGV PRVYDRIYTG INQKIQYGGL IAKHLFQYAY NYKLGNLMKG FKQHEASPFF DKIVFSKIKE GLGGRIRLML SGAAPLPRHI
401: EEFMRVTSCS VLAQGYGLTE SCSGCFTSIA NVISMIGTVG PPVTAVEARL ESVPEMGYDA LSSAPRGEIC LRGQTLFSGY YKRPDLTEEV FSDGWFHTGD
501: IGEWQPDGTM KIIDRKKNIF KLSQGEYVAV EVLESAYAQS QLVASVWVYG NSFESFLVAV VVPEKQAIED WAALNGKSGD YAELCSDPKA RRYIQDELNQ
601: TGKKLGLRGF EMLRAVHLEP VPFSIDKDLI TPTFKLKRPQ LLKHYKNKIM LQDRVDQLYK DAKMGTAQ

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.