Factsheet for HORVU5Hr1G052100.13

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

plastid 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Predotar:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G174000.1	Wheat	peroxisome	95.78	96.7
TraesCS5B01G166400.1	Wheat	golgi	95.78	96.7
TraesCS5A01G169600.1	Wheat	golgi	95.1	96.02
Os05t0317200-01	Rice	plastid	87.62	88.71
KXG27640	Sorghum	peroxisome	85.71	86.78
Zm00001d052399_P007	Maize	peroxisome	83.27	84.3
Zm00001d005019_P004	Maize	plasma membrane	82.58	83.61
VIT_12s0057g01270.t01	Wine grape	peroxisome	68.16	69.68
Solyc07g045290.2.1	Tomato	plastid	68.71	69.56
PGSC0003DMT400044860	Potato	peroxisome	68.3	69.15
PGSC0003DMT400000868	Potato	peroxisome	68.44	68.81
TraesCS3B01G570800.1	Wheat	peroxisome	19.18	68.78
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	67.35	68.28
CDY15082	Canola	peroxisome	66.26	68.02
KRG89997	Soybean	endoplasmic reticulum	62.31	67.95
Solyc12g009040.1.1	Tomato	plastid	66.26	67.83
KRH17725	Soybean	peroxisome	66.8	67.72
CDY66248	Canola	peroxisome	66.12	67.41
Bra013210.1-P	Field mustard	peroxisome	65.99	67.27
AT2G04350.1	Thale cress	peroxisome	65.03	66.39
HORVU4Hr1G019780.1	Barley	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	60.41	63.7
HORVU5Hr1G036460.1	Barley	endoplasmic reticulum	58.91	62.03
HORVU3Hr1G059140.1	Barley	peroxisome	29.8	33.28
HORVU5Hr1G099350.15	Barley	peroxisome	29.39	32.34
HORVU5Hr1G046950.26	Barley	peroxisome	28.44	30.69
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	29.12	29.97
HORVU5Hr1G040740.17	Barley	peroxisome	27.62	28.39
HORVU4Hr1G025820.9	Barley	peroxisome, plastid	28.3	27.73
HORVU1Hr1G016200.16	Barley	peroxisome	27.21	25.64
HORVU5Hr1G120850.1	Barley	plastid	21.5	23.07
HORVU1Hr1G027510.1	Barley	cytosol	1.5	20.37
HORVU1Hr1G032500.2	Barley	peroxisome	3.54	16.46

Protein Annotations

Gene3D:3.30.300.30	Gene3D:3.40.50.12780	MapMan:50.6.2	UniProt:A0A287R816	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004467	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009536	GO:GO:0009941	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
EnsemblPlantsGene:HORVU5Hr1G052100	EnsemblPlants:HORVU5Hr1G052100.13	PFAM:PF00501	ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF30
SUPFAM:SSF56801	TMHMM:TMhelix	UniParc:UPI000B47B032	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:407745244..407757505

Molecular Weight (calculated)

80785.0 Da

IEP (calculated)

8.686

GRAVY (calculated)

-0.039

Length

735 amino acids

Sequence
(BLAST)

001: MVQIWHKIMA TITGKNPNMS ILQRLSTSDL PLVKEYGLPG VIGALLMAIV IPILLSSMFS KKVKKRAVQA DVGGEAGLAM RNSRFSSLIQ VPWEGATTMA
101: ALFEMASKKY TRHRCLGTRK LISSEFIEAA DGRKFEKLHL GEYEWNSYAE AFNRACNFAS GLIKMGHQLD SRAAIFSDTR AEWIIAAQGC FRQNLTVVTI
201: YASLGEDALV HSLNEVTQVS TLICDSKQLK KLPAVSSKLH SLKHVIYIED EPVDADTLNQ LKHLTALSFN AVEELGKTSH ADARLPSSND TAVIMYTSGS
301: TGLPKGVMIT HGNMVATIAA VRTIIPNLGT RDVYLAYLPL AHVFELAAES VMLASGVAIG YGSALTMTDA SNKIKKGTKG DVSVLKPTLM ISVPAILDRI
401: RDAVFKKVAE KGGIAKKLFD IAYKRNLGAI EGSWSGSWAP ERLIWNSIIF KPIRSMLGGH IRFILCGGAP LSSETQRFIN ICLGVPVGQG YGLTETCAGA
501: AFSEWDDISV GRVGPPLPCC YVKLISWEEG GYRISDSPMP RGEVVVGGYS ITKGYFNNEA KTNEVYKVDE RGIRWFYTGD IGQFHPDGCV EIIDRKKDIV
601: KLQHGEYVSL GKVESALQTS NYVDNIMVYA DPFHSYCVAL VVPPHQALEK WAQNSGISYK DIEELCHNDQ AIKEVQQSLS KAAKAARLEK FEIPAKIVLL
701: PEPWTPESGL VTAALKLKRE QLKTKFKDDL NKLYH

Best Arabidopsis Sequence Match ( AT1G77590.1 )
(BLAST)

001: MIPYAAGVIV PLALTFLVQK SKKEKKRGVV VDVGGEPGYA IRNHRFTEPV SSHWEHISTL PELFEISCNA HSDRVFLGTR KLISREIETS EDGKTFEKLH
101: LGDYEWLTFG KTLEAVCDFA SGLVQIGHKT EERVAIFADT REEWFISLQG CFRRNVTVVT IYSSLGEEAL CHSLNETEVT TVICGSKELK KLMDISQQLE
201: TVKRVICMDD EFPSDVNSNW MATSFTDVQK LGRENPVDPN FPLSADVAVI MYTSGSTGLP KGVMMTHGNV LATVSAVMTI VPDLGKRDIY MAYLPLAHIL
301: ELAAESVMAT IGSAIGYGSP LTLTDTSNKI KKGTKGDVTA LKPTIMTAVP AILDRVRDGV RKKVDAKGGL SKKLFDFAYA RRLSAINGSW FGAWGLEKLL
401: WDVLVFRKIR AVLGGQIRYL LSGGAPLSGD TQRFINICVG APIGQGYGLT ETCAGGTFSE FEDTSVGRVG APLPCSFVKL VDWAEGGYLT SDKPMPRGEI
501: VIGGSNITLG YFKNEEKTKE VYKVDEKGMR WFYTGDIGRF HPDGCLEIID RKKDIVKLQH GEYVSLGKVE AALSISPYVE NIMVHADSFY SYCVALVVAS
601: QHTVEGWASK QGIDFANFEE LCTKEQAVKE VYASLVKAAK QSRLEKFEIP AKIKLLASPW TPESGLVTAA LKLKRDVIRR EFSEDLTKLY A

Arabidopsis Description

LACS9Long chain acyl-CoA synthetase 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CAP8]
SUBAcon: [peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.