Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15082 | Canola | peroxisome | 88.47 | 88.97 |
| CDY66248 | Canola | peroxisome | 88.75 | 88.63 |
| Bra013210.1-P | Field mustard | peroxisome | 88.61 | 88.49 |
| VIT_12s0057g01270.t01 | Wine grape | peroxisome | 70.28 | 70.38 |
| KRG89997 | Soybean | endoplasmic reticulum | 65.83 | 70.33 |
| KRG89995 | Soybean | endoplasmic reticulum, mitochondrion | 70.56 | 70.07 |
| PGSC0003DMT400000868 | Potato | peroxisome | 70.97 | 69.9 |
| Solyc07g045290.2.1 | Tomato | plastid | 70.14 | 69.56 |
| PGSC0003DMT400044860 | Potato | peroxisome | 70.0 | 69.42 |
| KRH17725 | Soybean | peroxisome | 69.72 | 69.24 |
| Solyc12g009040.1.1 | Tomato | plastid | 68.33 | 68.52 |
| KXG27640 | Sorghum | peroxisome | 67.78 | 67.22 |
| Os05t0317200-01 | Rice | plastid | 67.08 | 66.53 |
| Zm00001d005019_P004 | Maize | plasma membrane | 66.67 | 66.12 |
| Zm00001d052399_P007 | Maize | peroxisome | 66.39 | 65.84 |
| TraesCS5B01G166400.1 | Wheat | golgi | 66.25 | 65.52 |
| AT1G77590.1 | Thale cress | peroxisome, plastid | 62.78 | 65.41 |
| TraesCS5D01G174000.1 | Wheat | peroxisome | 65.97 | 65.25 |
| HORVU5Hr1G052100.13 | Barley | peroxisome | 66.39 | 65.03 |
| TraesCS5A01G169600.1 | Wheat | golgi | 65.69 | 64.97 |
| TraesCS3B01G570800.1 | Wheat | peroxisome | 14.72 | 51.71 |
| AT4G23850.1 | Thale cress | peroxisome | 30.14 | 32.58 |
| AT1G64400.1 | Thale cress | cytosol, peroxisome, plastid | 29.31 | 31.73 |
| AT3G05970.1 | Thale cress | plastid | 30.83 | 31.67 |
| AT1G49430.1 | Thale cress | peroxisome | 28.89 | 31.28 |
| AT5G27600.1 | Thale cress | peroxisome, plastid | 30.28 | 31.14 |
| AT4G11030.1 | Thale cress | peroxisome | 28.33 | 30.63 |
| AT2G47240.2 | Thale cress | peroxisome | 27.92 | 30.45 |
| AT3G23790.1 | Thale cress | plastid | 22.92 | 22.85 |
| AT4G14070.1 | Thale cress | plastid | 21.94 | 21.73 |
| AT2G47245.1 | Thale cress | endoplasmic reticulum | 3.47 | 19.23 |
Protein Annotations
| Gene3D:3.40.50.12780 | MapMan:50.6.2 | EntrezGene:814974 | ProteinID:AAD25843.1 | ProteinID:AAM15458.1 | ProteinID:AEC05822.1 |
| ProteinID:AEC05823.1 | EMBL:AF503758 | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | ArrayExpress:AT2G04350 | EnsemblPlantsGene:AT2G04350 |
| RefSeq:AT2G04350 | TAIR:AT2G04350 | RefSeq:AT2G04350-TAIR-G | EnsemblPlants:AT2G04350.1 | TAIR:AT2G04350.1 | EMBL:AY052664 |
| Unigene:At.21686 | EMBL:BT002288 | GO:GO:0000166 | GO:GO:0001676 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004467 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006629 | GO:GO:0006631 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009536 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016874 | GO:GO:0102391 | Symbol:LACS8 | RefSeq:NP_178516.1 | RefSeq:NP_849934.1 | PFAM:PF00501 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00455 | PANTHER:PTHR43272 | PANTHER:PTHR43272:SF30 | UniProt:Q9SJD4 | SUPFAM:SSF56801 |
| TMHMM:TMhelix | UniParc:UPI00000AC3C0 | SEG:seg | : | : | : |
Description
LACS8Long chain acyl-CoA synthetase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJD4]
Coordinates
chr2:+:1515634..1519308
Molecular Weight (calculated)
78347.5 Da
IEP (calculated)
7.699
GRAVY (calculated)
-0.109
Length
720 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSGVNPMD SPSKGSDFGV YGIIGGGIVA LLVPVLLSVV LNGTKKGKKR GVPIKVGGEE GYTMRHARAP ELVDVPWEGA ATMPALFEQS CKKYSKDRLL
101: GTREFIDKEF ITASDGRKFE KLHLGEYKWQ SYGEVFERVC NFASGLVNVG HNVDDRVAIF SDTRAEWFIA FQGCFRQSIT VVTIYASLGE EALIYSLNET
201: RVSTLICDSK QLKKLSAIQS SLKTVKNIIY IEEDGVDVAS SDVNSMGDIT VSSISEVEKL GQKNAVQPIL PSKNGVAVIM FTSGSTGLPK GVMITHGNLV
301: ATAAGVMKVV PKLDKNDTYI AYLPLAHVFE LEAEIVVFTS GSAIGYGSAM TLTDTSNKVK KGTKGDVSAL KPTIMTAVPA ILDRVREGVL KKVEEKGGMA
401: KTLFDFAYKR RLAAVDGSWF GAWGLEKMLW DALVFKKIRA VLGGHIRFML VGGAPLSPDS QRFINICMGS PIGQGYGLTE TCAGATFSEW DDPAVGRVGP
501: PLPCGYVKLV SWEEGGYRIS DKPMPRGEIV VGGNSVTAGY FNNQEKTDEV YKVDEKGTRW FYTGDIGRFH PDGCLEVIDR KKDIVKLQHG EYVSLGKVEA
601: ALGSSNYVDN IMVHADPINS YCVALVVPSR GALEKWAEEA GVKHSEFAEL CEKGEAVKEV QQSLTKAGKA AKLEKFELPA KIKLLSEPWT PESGLVTAAL
701: KIKREQIKSK FKDELSKLYA
101: GTREFIDKEF ITASDGRKFE KLHLGEYKWQ SYGEVFERVC NFASGLVNVG HNVDDRVAIF SDTRAEWFIA FQGCFRQSIT VVTIYASLGE EALIYSLNET
201: RVSTLICDSK QLKKLSAIQS SLKTVKNIIY IEEDGVDVAS SDVNSMGDIT VSSISEVEKL GQKNAVQPIL PSKNGVAVIM FTSGSTGLPK GVMITHGNLV
301: ATAAGVMKVV PKLDKNDTYI AYLPLAHVFE LEAEIVVFTS GSAIGYGSAM TLTDTSNKVK KGTKGDVSAL KPTIMTAVPA ILDRVREGVL KKVEEKGGMA
401: KTLFDFAYKR RLAAVDGSWF GAWGLEKMLW DALVFKKIRA VLGGHIRFML VGGAPLSPDS QRFINICMGS PIGQGYGLTE TCAGATFSEW DDPAVGRVGP
501: PLPCGYVKLV SWEEGGYRIS DKPMPRGEIV VGGNSVTAGY FNNQEKTDEV YKVDEKGTRW FYTGDIGRFH PDGCLEVIDR KKDIVKLQHG EYVSLGKVEA
601: ALGSSNYVDN IMVHADPINS YCVALVVPSR GALEKWAEEA GVKHSEFAEL CEKGEAVKEV QQSLTKAGKA AKLEKFELPA KIKLLSEPWT PESGLVTAAL
701: KIKREQIKSK FKDELSKLYA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.