Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80638 | Canola | peroxisome | 86.57 | 86.7 |
| Bra009951.1-P | Field mustard | peroxisome | 86.29 | 86.53 |
| CDX86151 | Canola | peroxisome | 86.29 | 86.41 |
| VIT_14s0128g00720.t01 | Wine grape | peroxisome | 68.14 | 75.36 |
| Solyc01g099100.2.1 | Tomato | plastid | 74.0 | 74.43 |
| AT3G05970.1 | Thale cress | plastid | 73.43 | 73.32 |
| EES15543 | Sorghum | peroxisome | 70.0 | 71.85 |
| Zm00001d023238_P002 | Maize | plasma membrane | 70.86 | 71.78 |
| TraesCS4A01G184900.2 | Wheat | peroxisome | 70.14 | 70.55 |
| Os12t0143900-01 | Rice | peroxisome | 71.0 | 70.3 |
| TraesCS4D01G128700.3 | Wheat | mitochondrion | 69.86 | 70.26 |
| TraesCS4B01G133700.3 | Wheat | peroxisome | 69.57 | 69.97 |
| Zm00001d052485_P001 | Maize | mitochondrion, peroxisome | 69.43 | 69.83 |
| TraesCS5B01G131800.3 | Wheat | peroxisome | 69.71 | 69.52 |
| Os11t0147000-01 | Rice | peroxisome | 70.29 | 69.39 |
| KXG27718 | Sorghum | peroxisome | 69.0 | 69.3 |
| TraesCS5A01G133200.2 | Wheat | peroxisome | 69.14 | 68.95 |
| TraesCS5D01G141300.1 | Wheat | peroxisome | 68.86 | 68.66 |
| HORVU5Hr1G040740.17 | Barley | peroxisome | 67.57 | 66.15 |
| HORVU4Hr1G025820.9 | Barley | peroxisome, plastid | 69.0 | 64.4 |
| PGSC0003DMT400063438 | Potato | peroxisome | 7.43 | 56.52 |
| AT1G49430.1 | Thale cress | peroxisome | 36.86 | 38.8 |
| AT4G23850.1 | Thale cress | peroxisome | 36.86 | 38.74 |
| AT4G11030.1 | Thale cress | peroxisome | 36.71 | 38.59 |
| AT1G64400.1 | Thale cress | cytosol, peroxisome, plastid | 35.86 | 37.74 |
| AT2G47240.2 | Thale cress | peroxisome | 35.29 | 37.42 |
| AT1G77590.1 | Thale cress | peroxisome, plastid | 30.43 | 30.82 |
| AT2G04350.1 | Thale cress | peroxisome | 31.14 | 30.28 |
| AT2G47245.1 | Thale cress | endoplasmic reticulum | 4.86 | 26.15 |
| AT3G23790.1 | Thale cress | plastid | 24.86 | 24.1 |
| AT4G14070.1 | Thale cress | plastid | 25.0 | 24.07 |
Protein Annotations
| Gene3D:3.40.50.12780 | MapMan:5.7.3.1 | EntrezGene:832820 | EMBL:AC007478 | ProteinID:AED93704.1 | EMBL:AF503757 |
| EMBL:AK118614 | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | ArrayExpress:AT5G27600 | EnsemblPlantsGene:AT5G27600 | RefSeq:AT5G27600 |
| TAIR:AT5G27600 | RefSeq:AT5G27600-TAIR-G | EnsemblPlants:AT5G27600.1 | TAIR:AT5G27600.1 | Unigene:At.20193 | GO:GO:0000166 |
| GO:GO:0001676 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004467 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 |
| GO:GO:0006629 | GO:GO:0006631 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009628 |
| GO:GO:0009651 | GO:GO:0009987 | GO:GO:0010193 | GO:GO:0016874 | GO:GO:0102391 | Symbol:LACS7 |
| RefSeq:NP_198112.2 | PFAM:PF00501 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | ScanProsite:PS00455 | PANTHER:PTHR43272 | PANTHER:PTHR43272:SF17 | UniProt:Q8LKS5 | SUPFAM:SSF56801 |
| UniParc:UPI000004BF31 | : | : | : | : | : |
Description
LACS7Long chain acyl-CoA synthetase 7, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8LKS5]
Coordinates
chr5:+:9742492..9747024
Molecular Weight (calculated)
77357.4 Da
IEP (calculated)
6.564
GRAVY (calculated)
-0.140
Length
700 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFASPEQRR LETIRSHIDT SPTNDQSSSL FLNATASSAS PFFKEDSYSV VLPEKLDTGK WNVYRSKRSP TKLVSRFPDH PEIGTLHDNF VHAVETYAEN
101: KYLGTRVRSD GTIGEYSWMT YGEAASERQA IGSGLLFHGV NQGDCVGLYF INRPEWLVVD HACAAYSFVS VPLYDTLGPD AVKFVVNHAN LQAIFCVPQT
201: LNILLSFLAE IPSIRLIVVV GGADEHLPSL PRGTGVTIVS YQKLLSQGRS SLHPFSPPKP EDIATICYTS GTTGTPKGVV LTHGNLIANV AGSSVEAEFF
301: PSDVYISYLP LAHIYERANQ IMGVYGGVAV GFYQGDVFKL MDDFAVLRPT IFCSVPRLYN RIYDGITSAV KSSGVVKKRL FEIAYNSKKQ AIINGRTPSA
401: FWDKLVFNKI KEKLGGRVRF MGSGASPLSP DVMDFLRICF GCSVREGYGM TETSCVISAM DDGDNLSGHV GSPNPACEVK LVDVPEMNYT SDDQPYPRGE
501: ICVRGPIIFK GYYKDEEQTR EILDGDGWLH TGDIGLWLPG GRLKIIDRKK NIFKLAQGEY IAPEKIENVY TKCRFVSQCF IHGDSFNSSL VAIVSVDPEV
601: MKDWAASEGI KYEHLGQLCN DPRVRKTVLA EMDDLGREAQ LRGFEFAKAV TLVPEPFTLE NGLLTPTFKI KRPQAKAYFA EAISKMYAEI AASNPIPSKL
101: KYLGTRVRSD GTIGEYSWMT YGEAASERQA IGSGLLFHGV NQGDCVGLYF INRPEWLVVD HACAAYSFVS VPLYDTLGPD AVKFVVNHAN LQAIFCVPQT
201: LNILLSFLAE IPSIRLIVVV GGADEHLPSL PRGTGVTIVS YQKLLSQGRS SLHPFSPPKP EDIATICYTS GTTGTPKGVV LTHGNLIANV AGSSVEAEFF
301: PSDVYISYLP LAHIYERANQ IMGVYGGVAV GFYQGDVFKL MDDFAVLRPT IFCSVPRLYN RIYDGITSAV KSSGVVKKRL FEIAYNSKKQ AIINGRTPSA
401: FWDKLVFNKI KEKLGGRVRF MGSGASPLSP DVMDFLRICF GCSVREGYGM TETSCVISAM DDGDNLSGHV GSPNPACEVK LVDVPEMNYT SDDQPYPRGE
501: ICVRGPIIFK GYYKDEEQTR EILDGDGWLH TGDIGLWLPG GRLKIIDRKK NIFKLAQGEY IAPEKIENVY TKCRFVSQCF IHGDSFNSSL VAIVSVDPEV
601: MKDWAASEGI KYEHLGQLCN DPRVRKTVLA EMDDLGREAQ LRGFEFAKAV TLVPEPFTLE NGLLTPTFKI KRPQAKAYFA EAISKMYAEI AASNPIPSKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.