CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032284.1-P	Field mustard	peroxisome	100.0	100.0
CDY59237	Canola	peroxisome	98.35	98.35
AT1G49430.1	Thale cress	peroxisome	91.14	91.28
KRH48841	Soybean	peroxisome	24.32	73.97
VIT_03s0063g01880.t01	Wine grape	peroxisome	67.72	68.44
KRH24533	Soybean	peroxisome	67.12	68.14
PGSC0003DMT400064817	Potato	peroxisome	67.42	68.13
KRH29538	Soybean	peroxisome	66.97	67.99
Solyc01g109180.2.1	Tomato	nucleus	67.12	67.83
KRG89197	Soybean	peroxisome	67.12	67.73
KRH49531	Soybean	peroxisome	66.97	67.58
GSMUA_Achr7P27390_001	Banana	peroxisome	64.11	65.09
Os11t0558300-01	Rice	peroxisome	61.71	62.18
KXG28707	Sorghum	peroxisome	61.11	61.2
TraesCS5D01G420300.1	Wheat	golgi	60.81	61.18
TraesCS5A01G411500.2	Wheat	golgi	60.96	61.14
HORVU5Hr1G099350.15	Barley	peroxisome	61.11	60.93
TraesCS5B01G415100.1	Wheat	peroxisome	60.51	60.88
Zm00001d053127_P005	Maize	mitochondrion	60.66	60.84
CDX86825	Canola	peroxisome	52.7	52.7
CDY47618	Canola	peroxisome	52.25	52.17
CDY03515	Canola	peroxisome	51.95	51.87
CDY68722	Canola	peroxisome	21.32	50.0
CDX94232	Canola	peroxisome	49.25	49.62
CDX80092	Canola	mitochondrion, peroxisome	21.77	49.49
CDY25270	Canola	peroxisome	48.8	49.32
CDY40856	Canola	peroxisome	52.85	48.02
CDY71490	Canola	extracellular, peroxisome	10.51	45.45
CDY69216	Canola	peroxisome	27.78	44.9
CDY72011	Canola	peroxisome	14.11	44.55
CDY27501	Canola	peroxisome	44.14	44.55
CDY51419	Canola	peroxisome	44.14	44.55
CDY46530	Canola	peroxisome	52.4	44.4
CDX80093	Canola	peroxisome	27.93	43.16
CDY37793	Canola	peroxisome	27.93	43.16
CDX95713	Canola	peroxisome	41.44	40.29
CDY64879	Canola	peroxisome	52.85	36.67
CDX74115	Canola	plastid	38.29	36.64
CDY49993	Canola	mitochondrion	38.14	36.49
CDY27725	Canola	plastid	37.24	36.1
CDY05217	Canola	plastid	37.24	36.1
CDX92843	Canola	peroxisome	11.56	35.98
CDX86151	Canola	peroxisome	37.09	35.34
CDX80638	Canola	peroxisome	37.09	35.34
CDY65251	Canola	peroxisome	10.51	29.91
CDX68052	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	31.08	29.87
CDX79212	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	30.93	29.73
CDY66248	Canola	peroxisome	31.23	28.85
CDY15082	Canola	peroxisome	30.93	28.77
CDY67321	Canola	plastid	24.62	22.84
CDY01190	Canola	plastid	24.02	22.25
CDY53212	Canola	plastid	24.47	21.79
CDY12731	Canola	plastid	23.57	21.66

Protein Annotations

Gene3D:3.40.50.12780	MapMan:50.6.2	GO:A0A078GS86	UniProt:A0A078GS86	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig
EnsemblPlants:CDY29350	ProteinID:CDY29350	ProteinID:CDY29350.1	GO:GO:0001676	GO:GO:0003674	GO:GO:0003824
GO:GO:0004467	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016874
GO:GO:0102391	EnsemblPlantsGene:GSBRNA2T00042919001	PFAM:PF00501	ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF4
SUPFAM:SSF56801	UniParc:UPI0002547BC8	:	:	:	:

Description

BnaA05g16170DBnaA05g16170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS86]

Coordinates

chrLK032235:-:404355..409262

Molecular Weight (calculated)

74377.4 Da

IEP (calculated)

6.332

GRAVY (calculated)

-0.158

Length

666 amino acids

Sequence
(BLAST)

001: MAAAADHVVI MEEGRQATAE HPSAGPVYRC KYAKDGLLDL PADLDSPWQL FSEAVKQYPN EQMLGRRVTV DSKVGPYTWI TYREAHDAAL RIGSAIRSRG
101: VNPGNCCGIY GSNCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK ALSSILACRK GCSSNLKTIV SFGEVSITQK EEAENQCVSL
201: FSWHEFLLMG NSDETTLPRK QKTDICTIMY TSGTTGEPKG VILSNAAIMV EVLSIDKMLQ VTDRSCDTSD LFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VHALKPTVFC GVPRVYDKLY AGVMQKISAG GLIRKKLFDL AYNYKLGNMR KGLSQEEASP RLDRLMFDKI KDALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY EAFSGDVARG EICLRGNSMF SGYHKRQDLT DQVVINGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW IYGNSFESFL VAVVVPERKA IEDWAKLNNQ SSPNDFESLC QNLKAQKYFL
601: DELNSTAKQY QLKGFEMLKA VHLEPNLFDI ERDLITPTFK LKRPQLLKHY KSIIDQLYTE AKASRA

Best Arabidopsis Sequence Match ( AT1G49430.1 )
(BLAST)

001: MSLAADNVLL VEEGRPATAE HPSAGPVYRC KYAKDGLLDL PTDIDSPWQF FSEAVKKYPN EQMLGQRVTT DSKVGPYTWI TYKEAHDAAI RIGSAIRSRG
101: VDPGHCCGIY GANCPEWIIA MEACMSQGIT YVPLYDSLGV NAVEFIINHA EVSLVFVQEK TVSSILSCQK GCSSNLKTIV SFGEVSSTQK EEAKNQCVSL
201: FSWNEFSLMG NLDEANLPRK RKTDICTIMY TSGTTGEPKG VILNNAAISV QVLSIDKMLE VTDRSCDTSD VFFSYLPLAH CYDQVMEIYF LSRGSSVGYW
301: RGDIRYLMDD VQALKPTVFC GVPRVYDKLY AGIMQKISAS GLIRKKLFDF AYNYKLGNMR KGFSQEEASP RLDRLMFDKI KEALGGRAHM LLSGAAPLPR
401: HVEEFLRIIP ASNLSQGYGL TESCGGSFTT LAGVFSMVGT VGVPMPTVEA RLVSVPEMGY DAFSADVPRG EICLRGNSMF SGYHKRQDLT DQVLIDGWFH
501: TGDIGEWQED GSMKIIDRKK NIFKLSQGEY VAVENLENTY SRCPLIAQIW VYGNSFESFL VGVVVPDRKA IEDWAKLNYQ SPNDFESLCQ NLKAQKYFLD
601: ELNSTAKQYQ LKGFEMLKAI HLEPNPFDIE RDLITPTFKL KRPQLLQHYK GIVDQLYSEA KRSMA

Arabidopsis Description

LACS2Long chain acyl-CoA synthetase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIA9]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.