CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03515	Canola	peroxisome	99.7	99.7
Bra013735.1-P	Field mustard	peroxisome	92.35	98.88
AT4G23850.1	Thale cress	peroxisome	92.95	93.09
CDX86825	Canola	peroxisome	80.81	80.93
Solyc08g082280.2.1	Tomato	nucleus, plastid	76.76	77.81
CDX94232	Canola	peroxisome	76.61	77.31
CDY25270	Canola	peroxisome	76.16	77.09
VIT_02s0025g01410.t01	Wine grape	peroxisome	76.16	76.74
Solyc08g008310.2.1	Tomato	peroxisome	67.92	75.88
KRH27846	Soybean	peroxisome	74.21	74.66
KRH77642	Soybean	endoplasmic reticulum	74.66	74.22
GSMUA_Achr3P32060_001	Banana	peroxisome	72.11	73.44
CDY40856	Canola	peroxisome	80.36	73.12
GSMUA_Achr6P14370_001	Banana	peroxisome	71.51	72.82
TraesCS3D01G237900.1	Wheat	peroxisome	71.81	72.8
TraesCS3B01G266100.1	Wheat	golgi	71.81	72.8
HORVU3Hr1G059140.1	Barley	peroxisome	71.81	72.8
KXG27302	Sorghum	cytosol	5.85	72.22
Zm00001d044016_P001	Maize	mitochondrion	70.46	71.76
KRH60037	Soybean	peroxisome	71.51	71.73
PGSC0003DMT400014954	Potato	cytosol	12.44	71.55
TraesCS3A01G237700.3	Wheat	peroxisome	71.21	70.79
TraesCS5B01G147300.1	Wheat	peroxisome	68.22	68.73
Zm00001d043851_P001	Maize	mitochondrion	68.22	68.52
TraesCS5A01G148700.1	Wheat	peroxisome	68.52	68.52
TraesCS5D01G144200.2	Wheat	peroxisome	68.37	68.37
Os01t0681200-01	Rice	plasma membrane	68.07	68.27
HORVU5Hr1G046950.26	Barley	peroxisome	68.37	66.96
Os01t0655800-01	Rice	plasma membrane	67.47	66.18
TraesCS7D01G110700.1	Wheat	peroxisome	64.47	66.15
TraesCS7B01G012700.1	Wheat	peroxisome	63.57	65.23
TraesCS7A01G115900.1	Wheat	peroxisome	61.47	64.98
Os06t0158000-01	Rice	plasma membrane	59.22	64.23
KRH41306	Soybean	peroxisome	24.44	63.67
Zm00001d045295_P001	Maize	extracellular	64.02	63.26
CDY46530	Canola	peroxisome	72.71	61.7
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	63.72	59.52
KRG94065	Soybean	vacuole	16.19	59.02
CDY68722	Canola	peroxisome	23.24	54.58
CDX80092	Canola	mitochondrion, peroxisome	23.54	53.58
CDY59237	Canola	peroxisome	52.62	52.7
CDY29350	Canola	peroxisome	52.17	52.25
CDY64879	Canola	peroxisome	72.86	50.62
CDY51419	Canola	peroxisome	48.43	48.94
CDY27501	Canola	peroxisome	48.28	48.79
CDY69216	Canola	peroxisome	30.13	48.79
CDY72011	Canola	peroxisome	15.14	47.87
CDY37793	Canola	peroxisome	30.43	47.1
CDX80093	Canola	peroxisome	30.43	47.1
CDX95713	Canola	peroxisome	44.38	43.21
CDY71490	Canola	extracellular, peroxisome	9.75	42.21
CDX92843	Canola	peroxisome	12.59	39.25
CDX80638	Canola	peroxisome	38.53	36.77
CDX86151	Canola	peroxisome	38.53	36.77
CDY05217	Canola	plastid	37.63	36.54
CDY27725	Canola	plastid	37.48	36.39
CDX74115	Canola	plastid	37.63	36.06
CDY49993	Canola	mitochondrion	37.48	35.92
CDX68052	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	31.93	30.74
CDX79212	Canola	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	31.78	30.59
CDY15082	Canola	peroxisome	31.93	29.75
CDY66248	Canola	peroxisome	32.08	29.68
CDY65251	Canola	peroxisome	9.9	28.21
CDY67321	Canola	plastid	23.54	21.87
CDY53212	Canola	plastid	23.39	20.86
CDY12731	Canola	plastid	22.34	20.55
CDY01190	Canola	plastid	22.04	20.45

Protein Annotations

EnsemblPlants:CDY47618	EnsemblPlantsGene:GSBRNA2T00087831001	Gene3D:3.40.50.12780	GO:A0A078IEP9	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9
PFAM:PF00501	ProteinID:CDY47618	ProteinID:CDY47618.1	ScanProsite:PS00455	SEG:seg	SUPFAM:SSF56801
UniParc:UPI0004EE49C3	UniProt:A0A078IEP9	MapMan:50.6.2	:	:	:

Description

BnaA01g13470DBnaA01g13470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IEP9]

Coordinates

chrLK032726:+:63286..67765

Molecular Weight (calculated)

74467.0 Da

IEP (calculated)

6.264

GRAVY (calculated)

-0.139

Length

667 amino acids

Sequence
(BLAST)

001: MTQQLEKFIF QVEEGREGSD GRPSVGPVYR SVFAKDGFPE PIEGMDSCWD VFRMSVEKYP NNPMLGRREI VDGKPGKYVW QTYQEVYDIV IKLGNSLRSC
101: GVEEQAKCGI YGANSPEWII SMEACNAHGL YCVPLYDTLG AGAVEFIITH SEVSIVFVEE KKISELFKTC PKATEYMKTV VSFGGVTREQ KEAAETFGLV
201: IYAWDEFLKL GEGKQFDLPI KKKSDICTIM YTSGTTGDPK GVMISNESIV TLIAGVIRLL KSANEALTVK DVYLSYLPLA HIFDRVIEEC FIQHGAAIGF
301: WRGDVKLLIE DLGELKPTIF CAVPRVLDRV YSGLQQKLAA GGFFKKFMFD SAFSFKYGHM KKGQSHVEAS PLCDKLVFSK VKQGLGGNVR IILSGAAPLA
401: SHVESFLRVV ACCHVLQGYG LTESCAGTFV SLPDRLDMLG TVGPPVPNVD IRLESVPEME YDALASTPRG EICIRGKTLF SGYYKREDLT KEVLIDGWLH
501: TGDVGEWQPN GSMKIIDRKK NIFKLSQGEY VAVENLENIY GEVQAVDSVW VYGNSFESFL IAVANPNQHI LEKWAAENGV SGDYNALCQN AKAKEFILGE
601: LVKMGKEKKM KGFEIIKAVH LDPVPFDMER DLLTPTYKKK RPQLLKHYQS VIDEMYKTTN ESLASRK

Best Arabidopsis Sequence Match ( AT4G23850.1 )
(BLAST)

001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG

Arabidopsis Description

LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.