Factsheet for Os01t0681200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01271	Sorghum	peroxisome	88.72	89.12
TraesCS5B01G147300.1	Wheat	peroxisome	87.82	88.22
Zm00001d043851_P001	Maize	mitochondrion	87.97	88.1
TraesCS5D01G144200.2	Wheat	peroxisome	88.27	88.01
TraesCS5A01G148700.1	Wheat	peroxisome	88.27	88.01
HORVU5Hr1G046950.26	Barley	peroxisome	88.42	86.34
GSMUA_Achr3P32060_001	Banana	peroxisome	76.24	77.4
OQU82479	Sorghum	peroxisome	80.9	74.41
VIT_02s0025g01410.t01	Wine grape	peroxisome	73.98	74.32
Bra033159.1-P	Field mustard	peroxisome	64.66	71.19
KRH27846	Soybean	peroxisome	70.98	71.19
KRH77642	Soybean	endoplasmic reticulum	71.43	70.79
Bra013735.1-P	Field mustard	peroxisome	65.41	69.82
KRH60037	Soybean	peroxisome	69.32	69.32
CDX86825	Canola	peroxisome	69.17	69.07
Bra035259.1-P	Field mustard	peroxisome	69.02	68.92
Os01t0655800-01	Rice	plasma membrane	69.92	68.38
CDY47618	Canola	peroxisome	68.27	68.07
CDY03515	Canola	peroxisome	68.12	67.92
AT4G23850.1	Thale cress	peroxisome	67.97	67.87
AT4G11030.1	Thale cress	peroxisome	67.67	67.57
Os06t0158000-01	Rice	plasma membrane	61.8	66.83
AT1G64400.1	Thale cress	cytosol, peroxisome, plastid	65.86	65.86
CDX94232	Canola	peroxisome	65.41	65.81
CDY25270	Canola	peroxisome	64.96	65.55
CDY40856	Canola	peroxisome	68.87	62.48
Os11t0558300-01	Rice	peroxisome	59.7	60.06
KRH41306	Soybean	peroxisome	22.86	59.38
KRG94065	Soybean	vacuole	16.09	58.47
CDY46530	Canola	peroxisome	68.12	57.63
Bra027700.1-P	Field mustard	peroxisome	68.57	55.21
Os05t0132100-02	Rice	plasma membrane	48.42	48.13
CDY64879	Canola	peroxisome	68.57	47.5
Os12t0143900-01	Rice	peroxisome	40.45	38.05
Os11t0147000-01	Rice	peroxisome	40.3	37.8
Os11t0169800-01	Rice	plastid	20.45	37.47
Os12t0168700-01	Rice	vacuole	33.83	32.23
Os05t0317200-01	Rice	plastid	33.23	30.44
Os03t0845500-01	Rice	plastid	23.91	21.2

Protein Annotations

EnsemblPlants:Os01t0681200-01	EnsemblPlantsGene:Os01g0681200	EntrezGene:4324393	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9
PFAM:PF00501	ProteinID:BAF05793.1	ProteinID:BAS73710.1	ProteinID:EEE55183.1	RefSeq:XP_015621736.1	ScanProsite:PS00455
SEG:seg	SUPFAM:SSF56801	UniParc:UPI0000DD8C78	UniProt:Q0JKD5	MapMan:50.6.2	:

Description

Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os01t0681200-01);Similar to Acyl-CoA synthetase (EC 6.2.1.3). (Os01t0681200-02)

Coordinates

chr1:-:28061734..28067159

Molecular Weight (calculated)

73579.6 Da

IEP (calculated)

6.390

GRAVY (calculated)

-0.193

Length

665 amino acids

Sequence
(BLAST)

001: MAASTMKHLV QVGEAREAAE EDGGAPSAGP AYRCAYGGGA ASPPAVPGLE CCWDIFRMTV ERCPDNKMLG RREIVDGKAG KYTWITYKEA YDTVIKVGAS
101: IRSLGVGKGG RCGIYGANCP EWVISMQACN AHGIYCVPLY DTLGAGAVEF ILCHAEVEIA FIEEKKIGEV LKTFPNATKY LKTIVSFGKV NPEQKEKVEQ
201: NGVSIYSWEE FLQLGGEEKY ELPTKQKDDI CTIMYTSGTT GDPKGVLISN RSIITIISAV DGFLANSKEQ LREDDVYISY LPLAHIFDRV LEEVFIHHGA
301: SIGFWRGDVK LLVEDIGELK PTIFCAVPRV LDRIYGGLQD KVSTGGFLKK TLFNVAYKYK QGNMVKGSKH EEAAAMFDKL VFTKVKRGLG GRVRLILSGA
401: APLSNHVEEY LRVVTCSLVL QGYGLTETCA GSFVSLPNNM SMLGTVGPPV PYVEVHLESV PEMGYDALSK ESPRGEICIR GDTLFSGYHK REDLTKEVLV
501: DGWFHTGDIG EWQSDGSMKI IDRKKNIFKL SQGEYVAVEN LENIFGQAPG VDSIWVYGNS FESCLVAVVN PNKQALERWA ESNGVTGDFA TMCEDPKAKE
601: FILGELTKTG KEKKLKGFEL IRAVHLEPVP FDMDRDLITP TYKKKRPQLL KYYQNVIDSM YKNMK

Best Arabidopsis Sequence Match ( AT4G23850.1 )
(BLAST)

001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG

Arabidopsis Description

LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.