Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043851_P001 | Maize | mitochondrion | 95.47 | 95.18 |
| KXG27302 | Sorghum | cytosol | 7.55 | 92.59 |
| Os01t0681200-01 | Rice | plasma membrane | 89.12 | 88.72 |
| TraesCS5B01G147300.1 | Wheat | peroxisome | 86.4 | 86.4 |
| TraesCS5A01G148700.1 | Wheat | peroxisome | 86.71 | 86.06 |
| TraesCS5D01G144200.2 | Wheat | peroxisome | 86.4 | 85.76 |
| HORVU5Hr1G046950.26 | Barley | peroxisome | 86.4 | 83.99 |
| OQU82479 | Sorghum | peroxisome | 87.61 | 80.22 |
| GSMUA_Achr3P32060_001 | Banana | peroxisome | 76.44 | 77.25 |
| EES01192 | Sorghum | peroxisome | 72.81 | 73.59 |
| OQU75859 | Sorghum | peroxisome | 68.88 | 70.26 |
| KXG19348 | Sorghum | peroxisome | 67.98 | 69.34 |
| KXG28707 | Sorghum | peroxisome | 58.01 | 57.74 |
| KXG21217 | Sorghum | peroxisome | 48.94 | 48.36 |
| EES15543 | Sorghum | peroxisome | 39.88 | 38.71 |
| KXG27718 | Sorghum | peroxisome | 38.97 | 37.02 |
| OQU82968 | Sorghum | endoplasmic reticulum, plasma membrane | 33.84 | 32.14 |
| KXG23059 | Sorghum | endoplasmic reticulum | 33.84 | 32.09 |
| KXG27640 | Sorghum | peroxisome | 33.38 | 30.44 |
| KXG37146 | Sorghum | plastid | 22.21 | 19.92 |
Protein Annotations
| Gene3D:3.40.50.12780 | MapMan:50.6.2 | InterPro:AMP-binding_CS | InterPro:AMP-dep_Synth/Lig | UniProt:C5XGR8 | EnsemblPlants:EES01271 |
| ProteinID:EES01271 | ProteinID:EES01271.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0010304 | GO:GO:0015996 | GO:GO:0019538 | GO:GO:0034256 |
| GO:GO:0055114 | PFAM:PF00501 | ScanProsite:PS00455 | PANTHER:PTHR43272 | PANTHER:PTHR43272:SF9 | EnsemblPlantsGene:SORBI_3003G258200 |
| SUPFAM:SSF56801 | unigene:Sbi.21773 | UniParc:UPI000220729E | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:59623226..59628704
Molecular Weight (calculated)
73139.1 Da
IEP (calculated)
6.456
GRAVY (calculated)
-0.178
Length
662 amino acids
Sequence
(BLAST)
(BLAST)
001: MVAGSMKHLV EVEPAKEAAG GAPSAGPTYR CAAGDNSASP PAVPGLDCCW DIFRMSVEKY PDNKMLGRRE IVDGKAGSYT WLTYKQVYDT VLKVGAAIRS
101: CGVGKGGRCG IYGANSPEWV ISMQACNAHG IYCVPLYDTL GAGAVEFVLC HAEVQIAFVE EKKVGEMLKT FPNATKYLKT IVSFGKVDPV HKEKVEQNGL
201: SIYSWEEFLQ LGGEEKFELP PKEKDDICTI MYTSGTTGDP KGVLISNKSI VTIVSAVDEF LNNSNEQLHG DDVYISYLPL AHIFDRVIEE VFIRHGASIG
301: FWRGDVKLLV EDIGELKPTV FCAVPRVLDR IYGGLQDKVT AGGFLKKTLF NVAYKYKQGN MLKGSKHEEA AAIFDRLVFT KVKRGLGGRV RLILSGAAPL
401: SRHVEEYLRV VTCSHVLQGY GLTETCAGSF VSLPNNMSML GTVGPPVPYV EVRLESVPEM GYDALSSEMP RGEICIRGDT LFSGYYKRED LTNEVLVDGW
501: FHTGDIGEWQ SDGSMKIIDR KKNIFKLSQG EYVAVENLEN IFGQTPGVDS IWVYGNSFES SLVAVVNPNK QALERWAESN GVTGDFATIC EDPKAKEFVL
601: GELTKMGKEK KLKGFELIRA VHLDPAPFDM ERDLITPTYK KKRPQLLKHY QSIIDGMYKS MK
101: CGVGKGGRCG IYGANSPEWV ISMQACNAHG IYCVPLYDTL GAGAVEFVLC HAEVQIAFVE EKKVGEMLKT FPNATKYLKT IVSFGKVDPV HKEKVEQNGL
201: SIYSWEEFLQ LGGEEKFELP PKEKDDICTI MYTSGTTGDP KGVLISNKSI VTIVSAVDEF LNNSNEQLHG DDVYISYLPL AHIFDRVIEE VFIRHGASIG
301: FWRGDVKLLV EDIGELKPTV FCAVPRVLDR IYGGLQDKVT AGGFLKKTLF NVAYKYKQGN MLKGSKHEEA AAIFDRLVFT KVKRGLGGRV RLILSGAAPL
401: SRHVEEYLRV VTCSHVLQGY GLTETCAGSF VSLPNNMSML GTVGPPVPYV EVRLESVPEM GYDALSSEMP RGEICIRGDT LFSGYYKRED LTNEVLVDGW
501: FHTGDIGEWQ SDGSMKIIDR KKNIFKLSQG EYVAVENLEN IFGQTPGVDS IWVYGNSFES SLVAVVNPNK QALERWAESN GVTGDFATIC EDPKAKEFVL
601: GELTKMGKEK KLKGFELIRA VHLDPAPFDM ERDLITPTYK KKRPQLLKHY QSIIDGMYKS MK
001: MSQQKKYIFQ VEEGKEGSDG RPSVGPVYRS IFAKDGFPDP IEGMDSCWDV FRMSVEKYPN NPMLGRREIV DGKPGKYVWQ TYQEVYDIVM KLGNSLRSVG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG
101: VKDEAKCGIY GANSPEWIIS MEACNAHGLY CVPLYDTLGA DAVEFIISHS EVSIVFVEEK KISELFKTCP NSTEYMKTVV SFGGVSREQK EEAETFGLVI
201: YAWDEFLKLG EGKQYDLPIK KKSDICTIMY TSGTTGDPKG VMISNESIVT LIAGVIRLLK SANEALTVKD VYLSYLPLAH IFDRVIEECF IQHGAAIGFW
301: RGDVKLLIED LAELKPTIFC AVPRVLDRVY SGLQKKLSDG GFLKKFIFDS AFSYKFGYMK KGQSHVEASP LFDKLVFSKV KQGLGGNVRI ILSGAAPLAS
401: HVESFLRVVA CCHVLQGYGL TESCAGTFVS LPDELGMLGT VGPPVPNVDI RLESVPEMEY DALASTARGE ICIRGKTLFS GYYKREDLTK EVLIDGWLHT
501: GDVGEWQPDG SMKIIDRKKN IFKLSQGEYV AVENIENIYG EVQAVDSVWV YGNSFESFLI AIANPNQHIL ERWAAENGVS GDYDALCQNE KAKEFILGEL
601: VKMAKEKKMK GFEIIKAIHL DPVPFDMERD LLTPTFKKKR PQLLKYYQSV IDEMYKTINA KFASRG
Arabidopsis Description
LACS4Long chain acyl-CoA synthetase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0A0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.