Factsheet for Bra035259.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86825	Canola	peroxisome	99.85	99.85
Bra033159.1-P	Field mustard	peroxisome	84.38	93.05
AT4G11030.1	Thale cress	peroxisome	90.24	90.24
Bra013735.1-P	Field mustard	peroxisome	76.43	81.7
VIT_02s0025g01410.t01	Wine grape	peroxisome	74.17	74.62
Solyc08g082280.2.1	Tomato	nucleus, plastid	72.97	73.86
Solyc08g008310.2.1	Tomato	peroxisome	65.02	72.53
KRH27846	Soybean	peroxisome	71.92	72.25
KRH77642	Soybean	endoplasmic reticulum	72.22	71.68
GSMUA_Achr3P32060_001	Banana	peroxisome	69.67	70.84
KXG27302	Sorghum	cytosol	5.71	70.37
Zm00001d044016_P001	Maize	mitochondrion	68.92	70.08
GSMUA_Achr6P14370_001	Banana	peroxisome	68.92	70.08
KRH60037	Soybean	peroxisome	69.52	69.62
TraesCS3D01G237900.1	Wheat	peroxisome	68.62	69.45
TraesCS3B01G266100.1	Wheat	golgi	68.62	69.45
HORVU3Hr1G059140.1	Barley	peroxisome	68.62	69.45
Os01t0681200-01	Rice	plasma membrane	68.92	69.02
TraesCS5B01G147300.1	Wheat	peroxisome	68.17	68.58
PGSC0003DMT400014954	Potato	cytosol	11.86	68.1
TraesCS5A01G148700.1	Wheat	peroxisome	68.17	68.07
TraesCS5D01G144200.2	Wheat	peroxisome	68.02	67.92
Zm00001d043851_P001	Maize	mitochondrion	67.12	67.32
TraesCS3A01G237700.3	Wheat	peroxisome	67.72	67.21
HORVU5Hr1G046950.26	Barley	peroxisome	68.17	66.67
TraesCS7D01G110700.1	Wheat	peroxisome	62.31	63.85
TraesCS7B01G012700.1	Wheat	peroxisome	62.01	63.54
Os01t0655800-01	Rice	plasma membrane	64.86	63.53
KRH41306	Soybean	peroxisome	24.32	63.28
Zm00001d045295_P001	Maize	extracellular	64.11	63.26
Os06t0158000-01	Rice	plasma membrane	57.96	62.76
TraesCS7A01G115900.1	Wheat	peroxisome	59.46	62.76
KRG94065	Soybean	vacuole	15.92	57.92
Bra027700.1-P	Field mustard	peroxisome	71.62	57.75
HORVU7Hr1G024350.1	Barley	endoplasmic reticulum, vacuole	61.26	57.14
Bra032284.1-P	Field mustard	peroxisome	52.7	52.7
Bra021392.1-P	Field mustard	peroxisome	48.5	48.94
Bra004467.1-P	Field mustard	peroxisome	48.65	46.48
Bra020793.1-P	Field mustard	plastid	34.53	36.57
Bra009951.1-P	Field mustard	peroxisome	38.14	36.39
Bra001177.1-P	Field mustard	plastid	37.24	35.63
Bra003678.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	31.38	30.16
Bra013210.1-P	Field mustard	peroxisome	31.98	29.54
Bra001919.1-P	Field mustard	plastid	22.82	21.17
Bra032757.1-P	Field mustard	plastid	21.77	20.17

Protein Annotations

EnsemblPlants:Bra035259.1	EnsemblPlants:Bra035259.1-P	EnsemblPlantsGene:Bra035259	Gene3D:3.40.50.12780	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:AMP-binding_CS	InterPro:AMP-dep_Synth/Lig	PANTHER:PTHR43272	PANTHER:PTHR43272:SF9
PFAM:PF00501	ScanProsite:PS00455	SUPFAM:SSF56801	UniParc:UPI0002546CE4	UniProt:M4F2G1	MapMan:50.6.2

Description

AT4G11030 (E=0.0) | long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative

Coordinates

chrA08:-:9647936..9651676

Molecular Weight (calculated)

74283.4 Da

IEP (calculated)

6.584

GRAVY (calculated)

-0.175

Length

666 amino acids

Sequence
(BLAST)

001: MTSQKRFIFE VEAAKEATDG KPSIGPVYRS TFAKDGFPNP IDGIDSCWDI FRTAVEKYPN NRMLGRREIV NNKAGKYEWK TYKEVYDIVL KLGNSLRSCG
101: IEEGGKCGIY GANCPEWIIS MEACNAHGLY CVPFYDTLGS GAVEFIISHA EVSIAFVEEK KIPELFKTCP NSTKYMKTVV SFGGVKSEQK EEAEKLGLVI
201: HAWDEFLKLG EGKQYDLPVK KKSDICTIMY TSGTTGDPKG VLMSNESIVT ITAGVRHFLA IFNESLTEKD VYISYLPLAH VFDRAVEECI IQVGGSIGFW
301: RGDVKLLIED LGELKPSIFC AVPRVLERVY TGLQQKLSVG GFFKKKVFNV AFSYKFGNMK KGQSHVEAAP FCDKLVFNKV KQGLGGNVRI ILSGAAPLAS
401: HIESFLRVVA CCHVLQGYGL TESCAGTFVT FPDELDMLGT VGPPVPNVDI RLESVPDMEY DALGSIPRGE ICIRGKTLFS GYHKREDLTK EVLIDGWFHT
501: GDVGEWQPDG SMKIIDRKKN IFKLAQGEYV AVENLENVYG QVEAIDSIWV YGNSFESFLI AVANPSQQTL ERWAAENGVN GDFDSICQNT KAKAFLLGEL
601: VKTAKERKLK GFEIIRAVHL EPVPFDIERD LLTPTYKKKR PQLLKYYQNV IDDMYKTAKE GQASVQ

Best Arabidopsis Sequence Match ( AT4G11030.1 )
(BLAST)

001: MTSQKRFIFE VEAAKEATDG NPSVGPVYRS TFAQNGFPNP IDGIQSCWDI FRTAVEKYPN NRMLGRREIS NGKAGKYVWK TYKEVYDIVI KLGNSLRSCG
101: IKEGEKCGIY GINCCEWIIS MEACNAHGLY CVPLYDTLGA GAVEFIISHA EVSIAFVEEK KIPELFKTCP NSTKYMKTVV SFGGVKPEQK EEAEKLGLVI
201: HSWDEFLKLG EGKQYELPIK KPSDICTIMY TSGTTGDPKG VMISNESIVT ITTGVMHFLG NVNASLSEKD VYISYLPLAH VFDRAIEECI IQVGGSIGFW
301: RGDVKLLIED LGELKPSIFC AVPRVLDRVY TGLQQKLSGG GFFKKKVFDV AFSYKFGNMK KGQSHVAASP FCDKLVFNKV KQGLGGNVRI ILSGAAPLAS
401: HIESFLRVVA CCNVLQGYGL TESCAGTFAT FPDELDMLGT VGPPVPNVDI RLESVPEMNY DALGSTPRGE ICIRGKTLFS GYYKREDLTK EVFIDGWLHT
501: GDVGEWQPNG SMKIIDRKKN IFKLAQGEYV AVENLENVYS QVEVIESIWV YGNSFESFLV AIANPAQQTL ERWAVENGVN GDFNSICQNA KAKAFILGEL
601: VKTAKENKLK GFEIIKDVHL EPVAFDMERD LLTPTYKKKR PQLLKYYQNV IHEMYKTTKE SLASGQ

Arabidopsis Description

LACS5Long chain acyl-CoA synthetase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9T009]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.