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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi

Predictor Summary:
  • cytosol 1
  • plastid 2
  • peroxisome 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, secretory
Any Predictor:cytosol, peroxisome, secretory
BaCelLo:cytosol
iPSORT:plastid
MultiLoc:peroxisome
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68052 Canola endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 99.71 99.71
AT1G77590.1 Thale cress peroxisome, plastid 91.92 92.19
Os11t0169800-01 Rice plastid 40.84 77.96
VIT_18s0001g02810.t01 Wine grape vacuole 77.78 77.33
Solyc11g018580.1.1 Tomato plastid 66.67 75.74
KRH18736 Soybean peroxisome, plastid 74.89 74.57
GSMUA_Achr1P13190_001 Banana vacuole 68.98 74.45
GSMUA_Achr8P30270_001 Banana peroxisome, plastid 74.75 74.32
GSMUA_Achr11P... Banana endoplasmic reticulum 74.31 73.89
PGSC0003DMT400002337 Potato mitochondrion 74.17 73.85
KXG23059 Sorghum endoplasmic reticulum 74.31 73.78
TraesCS5A01G117700.1 Wheat endoplasmic reticulum, vacuole 73.59 73.07
TraesCS5B01G118000.1 Wheat endoplasmic reticulum 73.59 73.07
TraesCS5D01G129800.1 Wheat golgi 73.59 73.07
KRH53234 Soybean mitochondrion 73.02 72.91
Os12t0168700-01 Rice vacuole 73.3 72.78
Zm00001d023538_P002 Maize plastid 73.3 72.78
HORVU5Hr1G036460.1 Barley endoplasmic reticulum 72.87 72.35
TraesCS4D01G108300.1 Wheat endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 71.28 70.88
TraesCS4B01G110600.1 Wheat endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 71.14 70.73
HORVU4Hr1G019780.1 Barley endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole 71.14 70.73
TraesCS4A01G207000.1 Wheat golgi 71.28 70.57
OQU82968 Sorghum endoplasmic reticulum, plasma membrane 70.71 70.3
Zm00001d053009_P009 Maize plastid 70.56 70.06
GSMUA_Achr2P08130_001 Banana peroxisome, plastid 57.29 70.02
KRH16338 Soybean plastid, vacuole 65.22 69.86
CDY15082 Canola peroxisome 64.94 62.85
CDY66248 Canola peroxisome 65.22 62.69
CDY68722 Canola peroxisome 15.73 38.38
CDX80092 Canola mitochondrion, peroxisome 16.16 38.23
CDX92843 Canola peroxisome 11.26 36.45
CDY69216 Canola peroxisome 21.36 35.92
CDX80093 Canola peroxisome 21.64 34.8
CDY37793 Canola peroxisome 21.64 34.8
CDY05217 Canola plastid 32.03 32.31
CDY27725 Canola plastid 31.89 32.17
CDY51419 Canola peroxisome 30.59 32.12
CDX74115 Canola plastid 32.03 31.9
CDY49993 Canola mitochondrion 32.03 31.9
CDY47618 Canola peroxisome 30.59 31.78
CDY03515 Canola peroxisome 30.45 31.63
CDY27501 Canola peroxisome 30.01 31.52
CDX86825 Canola peroxisome 30.01 31.23
CDX80638 Canola peroxisome 31.31 31.04
CDY29350 Canola peroxisome 29.73 30.93
CDY59237 Canola peroxisome 29.73 30.93
CDX86151 Canola peroxisome 31.17 30.9
CDX94232 Canola peroxisome 28.28 29.65
CDY25270 Canola peroxisome 28.14 29.59
CDY65251 Canola peroxisome 9.81 29.06
CDX95713 Canola peroxisome 28.14 28.47
CDY40856 Canola peroxisome 29.87 28.24
CDY46530 Canola peroxisome 30.01 26.46
CDY71490 Canola extracellular, peroxisome 5.34 24.03
CDY72011 Canola peroxisome 7.22 23.7
CDY64879 Canola peroxisome 30.45 21.98
CDY67321 Canola plastid 22.51 21.73
CDY12731 Canola plastid 22.37 21.38
CDY01190 Canola plastid 22.08 21.28
CDY53212 Canola plastid 22.22 20.59
Protein Annotations
Gene3D:3.40.50.12780MapMan:50.6.2GO:A0A078CR58InterPro:AMP-binding_CSInterPro:AMP-dep_Synth/LigEnsemblPlants:CDX79212
ProteinID:CDX79212ProteinID:CDX79212.1GO:GO:0001676GO:GO:0003674GO:GO:0003824GO:GO:0004467
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016874GO:GO:0102391
EnsemblPlantsGene:GSBRNA2T00131803001PFAM:PF00501ScanProsite:PS00455PANTHER:PTHR43272PANTHER:PTHR43272:SF29SUPFAM:SSF56801
UniParc:UPI0004EF2CF6SEG:seg::::
Description
BnaC06g20910D
Coordinates
chrLK031817:-:334946..338502
Molecular Weight (calculated)
75995.6 Da
IEP (calculated)
6.649
GRAVY (calculated)
-0.063
Length
693 amino acids
Sequence
(BLAST)
001: MIPYAAGVIV PLALTLLVRN AKKDKKRGVV VDDVGGEPGH TVRNHRFKDP VSSHWEDIST LPELFEISCK SHSDRFFLGT RRLIAREVET SEDGKVFEKL
101: HLGDYEWKTF GETLEAVCSF ASGLVQIGHK SEERVAIFAD TREEWFIALQ GCFRRNVTVV TIYSSLGEEA LCHSLNETEV TTVICGNKEL KKLMDISQQL
201: ETVKRVICMD DEFPSEASST WTTTSLADVQ KLGRESPVDP SFPLSADVAV IMYTSGSTGL PKGVMMTHGN VLATVSAVMT IVPDLGKRDT YMAYLPLAHI
301: LELAAESVMA TIGSAIGYGS PLTLTDTSNK IKKGTKGDVT ALKPTIMTAV PAILDRVRDG VRKKVDAKGG AAKKLFDFAY ARRLSAINGS WFGAWGLEKL
401: LWDVLVFGKI RAVLGGQLRY LLSGGAPLSG DTQRFINICV GAPIGQGYGL TETCAGGTFS EFDDTSVGRV GAPLPCSFVK LIDWPEGGYL ISDKPMPRGE
501: IVIGGSNITL GYFKNEEKTK EVYKVDEKGM RWFYTGDIGQ FHPDGCLEII DRKKDIVKLQ HGEYVSLGKV EAALSISPYV ENIMVHADPF YSYCVALVVA
601: AQQTLEGWAS KQGIEFTNFE ELCAKEQAVK EVYASLVKAA KQSRLEKFEI PAKIKVLAAP WTPESGLVTA ALKLKRDVIR KEFSEDLTKL YAS
Best Arabidopsis Sequence Match ( AT1G77590.1 )
(BLAST)
001: MIPYAAGVIV PLALTFLVQK SKKEKKRGVV VDVGGEPGYA IRNHRFTEPV SSHWEHISTL PELFEISCNA HSDRVFLGTR KLISREIETS EDGKTFEKLH
101: LGDYEWLTFG KTLEAVCDFA SGLVQIGHKT EERVAIFADT REEWFISLQG CFRRNVTVVT IYSSLGEEAL CHSLNETEVT TVICGSKELK KLMDISQQLE
201: TVKRVICMDD EFPSDVNSNW MATSFTDVQK LGRENPVDPN FPLSADVAVI MYTSGSTGLP KGVMMTHGNV LATVSAVMTI VPDLGKRDIY MAYLPLAHIL
301: ELAAESVMAT IGSAIGYGSP LTLTDTSNKI KKGTKGDVTA LKPTIMTAVP AILDRVRDGV RKKVDAKGGL SKKLFDFAYA RRLSAINGSW FGAWGLEKLL
401: WDVLVFRKIR AVLGGQIRYL LSGGAPLSGD TQRFINICVG APIGQGYGLT ETCAGGTFSE FEDTSVGRVG APLPCSFVKL VDWAEGGYLT SDKPMPRGEI
501: VIGGSNITLG YFKNEEKTKE VYKVDEKGMR WFYTGDIGRF HPDGCLEIID RKKDIVKLQH GEYVSLGKVE AALSISPYVE NIMVHADSFY SYCVALVVAS
601: QHTVEGWASK QGIDFANFEE LCTKEQAVKE VYASLVKAAK QSRLEKFEIP AKIKLLASPW TPESGLVTAA LKLKRDVIRR EFSEDLTKLY A
Arabidopsis Description
LACS9Long chain acyl-CoA synthetase 9, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CAP8]
SUBAcon: [peroxisome,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.