CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69184	Soybean	peroxisome	84.38	45.0
KRH31765	Soybean	peroxisome	83.52	44.55
Zm00001d010943_P001	Maize	peroxisome	15.34	38.3
KRH68292	Soybean	endoplasmic reticulum	71.02	37.76
KRG96554	Soybean	peroxisome	71.02	37.76
VIT_07s0005g01790.t01	Wine grape	peroxisome	67.61	35.95
KRH48841	Soybean	peroxisome	21.02	33.79
PGSC0003DMT400023374	Potato	peroxisome	63.35	33.74
CDY68722	Canola	peroxisome	26.7	33.1
CDX80092	Canola	mitochondrion, peroxisome	26.42	31.74
CDY69216	Canola	peroxisome	36.65	31.31
Zm00001d024723_P001	Maize	peroxisome	58.24	30.6
CDY37793	Canola	peroxisome	37.22	30.39
CDX80093	Canola	peroxisome	37.22	30.39
AT2G47240.2	Thale cress	peroxisome	56.82	30.3
KXG21217	Sorghum	peroxisome	57.39	30.15
TraesCS1B01G093600.1	Wheat	peroxisome	56.25	29.55
GSMUA_Achr8P10780_001	Banana	peroxisome	55.68	29.52
Os05t0132100-02	Rice	plasma membrane	55.68	29.3
TraesCS1A01G075000.1	Wheat	golgi	55.68	29.25
TraesCS1D01G077600.1	Wheat	golgi	55.68	29.25
Bra021392.1-P	Field mustard	peroxisome	54.26	28.94
CDY51419	Canola	peroxisome	54.26	28.94
CDY27501	Canola	peroxisome	53.69	28.64
Bra004467.1-P	Field mustard	peroxisome	55.4	27.98
CDY71490	Canola	extracellular, peroxisome	11.08	25.32
HORVU1Hr1G016200.16	Barley	peroxisome	55.68	25.13
KRH49531	Soybean	peroxisome	43.75	23.33
KRG89197	Soybean	peroxisome	43.47	23.18
KRH60037	Soybean	peroxisome	43.75	23.16
KRH77642	Soybean	endoplasmic reticulum	43.47	22.8
KRH27846	Soybean	peroxisome	42.9	22.78
CDX95713	Canola	peroxisome	44.03	22.63
KRH24533	Soybean	peroxisome	41.76	22.41
KRH29538	Soybean	peroxisome	41.76	22.41
KRH41306	Soybean	peroxisome	16.19	22.27
KRH57847	Soybean	cytosol	4.83	19.32
KRH26020	Soybean	cytosol	4.83	19.1
CDY72011	Canola	peroxisome	11.08	18.48
KRH35544	Soybean	endoplasmic reticulum, mitochondrion	32.95	16.67
KRG91264	Soybean	peroxisome	32.95	16.62
KRG94065	Soybean	vacuole	8.52	16.39
KRG89997	Soybean	endoplasmic reticulum	28.41	14.84
KRH18736	Soybean	peroxisome, plastid	28.69	14.51
KRH53234	Soybean	mitochondrion	28.12	14.27
KRH17725	Soybean	peroxisome	28.12	13.66
KRG89995	Soybean	endoplasmic reticulum, mitochondrion	27.84	13.52
KRH16338	Soybean	plastid, vacuole	24.72	13.45
KRH31560	Soybean	plastid	21.02	10.28
KRH58837	Soybean	plastid	21.31	10.23
KRH13185	Soybean	cytosol	13.92	7.84

Protein Annotations

Gene3D:2.30.38.10	Gene3D:3.40.50.12780	MapMan:35.1	EMBL:ACUP02001931	InterPro:AMP-bd_C	InterPro:AMP-binding_CS
InterPro:AMP-dep_Synth/Lig	EnsemblPlantsGene:GLYMA_03G092900	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
UniProt:K7KDZ7	EnsemblPlants:KRH66241	ProteinID:KRH66241	ProteinID:KRH66241.1	PFAM:PF00501	PFAM:PF13193
ScanProsite:PS00455	PANTHER:PTHR43272	PANTHER:PTHR43272:SF6	SUPFAM:SSF56801	UniParc:UPI000294CA87	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:27567822..27571932

Molecular Weight (calculated)

40357.4 Da

IEP (calculated)

7.612

GRAVY (calculated)

-0.131

Length

352 amino acids

Sequence
(BLAST)

001: MQGPGAANFI IDHAEVDFVF IEDKKVKELL NPECKSSKRL KDKLKLIRVT TMVCFISLTK EETAKATAIR IKPYSWHDFL HLGKEYPKST FPPQAHDICA
101: IMYTSGTSGD PKGVVLTNEN VMALVRGMDL FMEQFEDKMI VDDVYLSFLP LAHILDCTIK WIKKAVEELN PVRRIVFGML YNYNNKQRRL REEKVQTQIY
201: TGSATPLCLQ LTKEAIKDGW FHTGDIGEML PNGVIKIIDM NKNLVKLSQG EYIALEHLEN VYGVTPIVED IWVYGNSFKS MLVAVVVPNE EVANKWAYSN
301: GHIASFSKLY FLGQLKKYVL FELKLIVERN KLRGFEHIKG VILEPHEFDM KD

Best Arabidopsis Sequence Match ( AT2G47240.1 )
(BLAST)

001: MKSFAAKVEE GVKGIDGKPS VGPVYRNLLS EKGFPPIDSE ITTAWDIFSK SVEKFPDNNM LGWRRIVDEK VGPYMWKTYK EVYEEVLQIG SALRAAGAEP
101: GSRVGIYGVN CPQWIIAMEA CAAHTLICVP LYDTLGSGAV DYIVEHAEID FVFVQDTKIK GLLEPDCKCA KRLKAIVSFT NVSDELSHKA SEIGVKTYSW
201: IDFLHMGREK PEDTNPPKAF NICTIMYTSG TSGDPKGVVL THQAVATFVV GMDLYMDQFE DKMTHDDVYL SFLPLAHILD RMNEEYFFRK GASVGYYHGN
301: LNVLRDDIQE LKPTYLAGVP RVFERIHEGI QKALQELNPR RRFIFNALYK HKLAWLNRGY SHSKASPMAD FIAFRKIRDK LGGRIRLLVS GGAPLSPEIE
401: EFLRVTCCCF VVQGYGLTET LGGTALGFPD EMCMLGTVGI PAVYNEIRLE EVSEMGYDPL GENPAGEICI RGQCMFSGYY KNPELTEEVM KDGWFHTGDI
501: GEILPNGVLK IIDRKKNLIK LSQGEYVALE HLENIFGQNS VVQDIWVYGD SFKSMLVAVV VPNPETVNRW AKDLGFTKPF EELCSFPELK EHIISELKST
601: AEKNKLRKFE YIKAVTVETK PFDVERDLVT ATLKNRRNNL LKYYQVQIDE MYRKLASKKI

Arabidopsis Description

LACS1Long chain acyl-CoA synthetase 1 [Source:UniProtKB/Swiss-Prot;Acc:O22898]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.