Factsheet for GSMUA_Achr11P09600_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	plastid
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P21490_001	Banana	plastid	43.85	38.0
Zm00001d036633_P002	Maize	cytosol, plastid	15.38	35.09
Os05t0547100-01	Rice	plastid	19.23	34.48
Os03t0750900-00	Rice	plastid	28.46	33.95
HORVU5Hr1G095310.1	Barley	plastid	36.54	33.69
CDY16233	Canola	cytosol	16.54	33.59
Bra030205.1-P	Field mustard	plastid	30.38	30.98
VIT_00s0508g00040.t01	Wine grape	plastid	48.08	30.94
GSMUA_Achr2P21500_001	Banana	extracellular	18.46	30.38
TraesCS5A01G390400.1	Wheat	nucleus, plastid	41.92	30.36
Solyc04g014850.2.1	Tomato	plastid	44.62	30.21
PGSC0003DMT400060552	Potato	nucleus, plastid	44.62	30.21
TraesCS5B01G395300.1	Wheat	nucleus, plastid	41.54	30.17
Bra026238.1-P	Field mustard	nucleus, plastid	38.46	30.12
CDY42970	Canola	nucleus, plastid	38.46	29.94
TraesCS5D01G400200.1	Wheat	nucleus	41.15	29.8
Solyc11g012610.1.1	Tomato	nucleus, plastid	44.23	29.79
CDY35588	Canola	nucleus, plastid	38.08	29.55
PGSC0003DMT400034766	Potato	nucleus, plastid	43.46	29.2
KRH36578	Soybean	plastid	41.92	28.46
KRH11556	Soybean	nucleus, plastid	42.31	28.42
AT4G17240.1	Thale cress	nucleus, plastid	37.31	28.28
EER90867	Sorghum	plastid	40.38	26.32
Zm00001d021076_P001	Maize	cytosol, plastid	16.15	20.79

Protein Annotations

EnsemblPlants:GSMUA_Achr11P09600_001	EnsemblPlants:GSMUA_Achr11T09600_001	EnsemblPlantsGene:GSMUA_Achr11G09600_001	ncoils:Coil	PANTHER:PTHR35493	SEG:seg
UniParc:UPI000296783C	UniProt:M0RQU0	MapMan:35.2	:	:	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G09600_001]

Coordinates

chr11:-:7498419..7501448

Molecular Weight (calculated)

29193.8 Da

IEP (calculated)

8.691

GRAVY (calculated)

-0.636

Length

260 amino acids

Sequence
(BLAST)

001: MASIRPSYHL FASVDSRSSS DLSDRRNGGK NLSYPRRLIA NSNAHEAPSE PIAATVAPVT ENSSRALVKV AFLGLSRKLY QKGGTAERKA EKALTEVNTN
101: TRTIAMALRR ERDLLAQNKE YEAKISELRL LIDEKNEEVE KLKDLCVKQR EELKALKDAI LFPDVMNSQL QVLLEKQGFE LKQAKQVRTD KYTSRTCFDE
201: HLSSPRTPIS DQQAANPLEY RSPDCMASDY GSPDEMFLKD LNPCLTPCFS KLKPQGTTVP

Best Arabidopsis Sequence Match ( AT4G17240.1 )
(BLAST)

001: MASRYNSYDS RSSVTSSIHS DLSSSAEFKS NKPISSKAIV RSKSSYLTKT TKPIKPDSNP GNLTNMMKKL MEMKKSNSKS KRVELVIPEE LKKIDTGKGG
101: GKSTLGTLQR KLFGKEKVKA LTEVKSNTRT LSMVLRSERE LLGMNKDQEV EIAELKFQLE EKNREVEKLK DLCLKQREEI KSLKSAVLFP DSMNSQINQM
201: QELNQAREII PNLQKQVISL NGQLQCIAQD LAEVKANKYL SESCYWQAQT SSYDSLEFSS GSPDGLALED LNPCLTPYTK KKPKEYERVD SAEESLSGRS
301: TITTTGGKVK SSSRSVKMSR SSEGKAGQRS EESKGWYRGG RMF

Arabidopsis Description

unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; Has 1142 Blast hits to 1055 proteins in 252 species: A /.../- 22; Bacteria - 318; Metazoa - 248; Fungi - 96; Plants - 59; Viruses - 3; Other Eukaryotes - 396 (source: NCBI BLink). [Source:TAIR;Acc:AT4G17240]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.