Factsheet for GSMUA_Achr2P21500_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036633_P002	Maize	cytosol, plastid	20.89	28.95
GSMUA_Achr11P...	Banana	plastid	30.38	18.46
HORVU5Hr1G095310.1	Barley	plastid	32.91	18.44
VIT_00s0508g00040.t01	Wine grape	plastid	43.04	16.83
TraesCS5B01G395300.1	Wheat	nucleus, plastid	34.81	15.36
TraesCS5A01G390400.1	Wheat	nucleus, plastid	34.81	15.32
TraesCS5D01G400200.1	Wheat	nucleus	34.18	15.04
EER90867	Sorghum	plastid	36.71	14.54
KRH11556	Soybean	nucleus, plastid	35.44	14.47
KRH36578	Soybean	plastid	34.81	14.36
Solyc11g012610.1.1	Tomato	nucleus, plastid	34.81	14.25
Solyc04g014850.2.1	Tomato	plastid	34.18	14.06
PGSC0003DMT400034766	Potato	nucleus, plastid	34.18	13.95
PGSC0003DMT400060552	Potato	nucleus, plastid	33.54	13.8
Zm00001d021076_P001	Maize	cytosol, plastid	15.82	12.38
CDY35588	Canola	nucleus, plastid	25.32	11.94
AT4G17240.1	Thale cress	nucleus, plastid	25.32	11.66
Bra026238.1-P	Field mustard	nucleus, plastid	24.05	11.45
CDY42970	Canola	nucleus, plastid	24.05	11.38
CDY16233	Canola	cytosol	6.33	7.81
Bra030205.1-P	Field mustard	plastid	8.23	5.1
Os05t0547100-01	Rice	plastid	4.43	4.83
GSMUA_Achr2P21490_001	Banana	plastid	8.23	4.33
Os03t0750900-00	Rice	plastid	2.53	1.83

Protein Annotations

EnsemblPlants:GSMUA_Achr2P21500_001	EnsemblPlants:GSMUA_Achr2T21500_001	EnsemblPlantsGene:GSMUA_Achr2G21500_001	PANTHER:PTHR35493	SEG:seg	SignalP:SignalP-noTM
UniParc:UPI000296D660	UniProt:M0S9Z1	MapMan:35.2	:	:	:

Description

Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G21500_001]

Coordinates

chr2:+:20943039..20944401

Molecular Weight (calculated)

17662.9 Da

IEP (calculated)

7.999

GRAVY (calculated)

-0.527

Length

158 amino acids

Sequence
(BLAST)

001: MHILFAFLIF FILFLVKADK YSAMSFLDGH ISSPTTPVLD QEAANPLEYS SGDPLASECG SPDEMFLKDL NPCLTPCFSK TKSQENNELV YGSPNQDRLF
101: QLKPRSSPSM LCGSHGGKLS RSSEHRHRPS LGSNTAQKVY KSDENKHPTV KPRYQTHL

Best Arabidopsis Sequence Match ( AT4G17240.2 )
(BLAST)

001: MASRYNSYDS RSSVTSSIHS DLSSSAEFKS NKPISSKAIV RSKSSYLTKT TKPIKPDSNP GNLTNMMKKL MEMKKSNSKS KRVELVIPEE LKKIDTGKGG
101: GKSTLGTLQR KLFGKEKVKA LTEVKSNTRT LSMIHERLAV CNQIKVFLQV EKLKDLCLKQ REEIKSLKSA VLFPDSMNSQ INQMQELNQA REIIPNLQKQ
201: VISLNGQLQC IAQDLAEVKA NKYLSESCYW QAQTSSYDSL EFSSGSPDGL ALEDLNPCLT PYTKKKPKEY ERVDSAEESL SGRSTITTTG GKVKSSSRSV
301: KMSRSSEGKA GQRSEESKGW YRGGRMF

Arabidopsis Description

unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; Has 1142 Blast hits to 1055 proteins in 252 species: A /.../- 22; Bacteria - 318; Metazoa - 248; Fungi - 96; Plants - 59; Viruses - 3; Other Eukaryotes - 396 (source: NCBI BLink). [Source:TAIR;Acc:AT4G17240]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.