Factsheet for GSMUA_Achr1P14520_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048981_P001	Maize	cytosol	39.13	86.75
HORVU2Hr1G042420.1	Barley	cytosol	50.0	71.32
PGSC0003DMT400003234	Potato	cytosol, mitochondrion	56.52	66.67
VIT_04s0008g04240.t01	Wine grape	extracellular	61.41	65.7
KRH16041	Soybean	plastid	52.17	64.86
TraesCS1A01G383200.1	Wheat	plastid	62.5	63.89
KRH05069	Soybean	plastid	54.89	62.73
CDX68864	Canola	plastid	56.52	62.65
Bra011358.1-P	Field mustard	plastid	56.52	61.54
CDX75257	Canola	plastid	56.52	61.54
TraesCS1D01G391000.1	Wheat	plastid	59.78	60.44
KXG22507	Sorghum	plastid	58.15	59.44
AT4G32590.3	Thale cress	plastid	53.8	55.0
TraesCS1B01G409300.1	Wheat	plastid	56.52	53.89
Zm00001d038946_P001	Maize	plastid	57.07	52.76
Os05t0555300-01	Rice	plastid	57.61	50.48
Zm00001d027567_P001	Maize	cytosol	34.78	46.04
Zm00001d039288_P001	Maize	cytosol	34.24	45.32
Solyc08g022140.1.1	Tomato	cytosol	19.02	38.46
Zm00001d041837_P001	Maize	endoplasmic reticulum, extracellular	23.91	32.12
HORVU1Hr1G084520.15	Barley	nucleus	38.59	31.84
GSMUA_Achr11P...	Banana	plastid	29.89	29.26

Protein Annotations

InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	Gene3D:3.10.20.30	MapMan:35.1	InterPro:Beta-grasp_dom_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0022900	GO:GO:0051536	EnsemblPlantsGene:GSMUA_Achr1G14520_001	EnsemblPlants:GSMUA_Achr1P14520_001	EnsemblPlants:GSMUA_Achr1T14520_001
InterPro:IPR001041	InterPro:IPR012675	UniProt:M0RZW0	PFAM:PF00111	PANTHER:PTHR23426	PANTHER:PTHR23426:SF32
SUPFAM:SSF54292	UniParc:UPI0002956A58	SEG:seg	:	:	:

Description

Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr1G14520_001]

Coordinates

chr1:+:11013380..11016172

Molecular Weight (calculated)

19819.8 Da

IEP (calculated)

9.722

GRAVY (calculated)

-0.446

Length

184 amino acids

Sequence
(BLAST)

001: MTAAASLLSL FPRPAPSQQP CRFSSVHPPP SRRKPSFSIS IPHAAAPSSS NPTPTTSEEP PKPQIELEFL GPKAGADGAY PVDKASAVSG EKLLRNIMLD
101: NKIELYAAYG KVMNCGGGGS CGTCIVEIVD GKDLLNERTK TEQRYLKKAS LLKPESWRLA CQTIVGNKEN SGKVVVQRTP QWKT

Best Arabidopsis Sequence Match ( AT4G32590.1 )
(BLAST)

001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKVVVQRIPQ WKK

Arabidopsis Description

2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.