CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048981_P001	Maize	cytosol	46.62	83.13
KRH05069	Soybean	plastid	87.84	80.75
PGSC0003DMT400003234	Potato	cytosol, mitochondrion	66.89	63.46
HORVU2Hr1G042420.1	Barley	cytosol	54.73	62.79
VIT_04s0008g04240.t01	Wine grape	extracellular	70.95	61.05
CDX68864	Canola	plastid	65.54	58.43
Bra011358.1-P	Field mustard	plastid	65.54	57.4
CDX75257	Canola	plastid	65.54	57.4
GSMUA_Achr1P14520_001	Banana	plastid	64.86	52.17
KXG22507	Sorghum	plastid	62.84	51.67
AT4G32590.3	Thale cress	plastid	60.81	50.0
TraesCS1D01G391000.1	Wheat	plastid	58.78	47.8
TraesCS1A01G383200.1	Wheat	plastid	58.11	47.78
Zm00001d027567_P001	Maize	cytosol	40.54	43.17
Zm00001d039288_P001	Maize	cytosol	40.54	43.17
Os05t0555300-01	Rice	plastid	59.46	41.9
Zm00001d038946_P001	Maize	plastid	56.08	41.71
TraesCS1B01G409300.1	Wheat	plastid	52.03	39.9
Solyc08g022140.1.1	Tomato	cytosol	19.59	31.87
Zm00001d041837_P001	Maize	endoplasmic reticulum, extracellular	27.7	29.93
KRH09910	Soybean	plastid	35.14	26.8
KRH23421	Soybean	mitochondrion, plastid	33.11	25.26
HORVU1Hr1G084520.15	Barley	nucleus	37.84	25.11

Protein Annotations

InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	Gene3D:3.10.20.30	MapMan:35.1	UniProt:A0A0R0GLS0	EMBL:ACUP02008768
InterPro:Beta-grasp_dom_sf	EnsemblPlantsGene:GLYMA_14G128500	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0022900	GO:GO:0051536
InterPro:IPR001041	InterPro:IPR012675	EnsemblPlants:KRH16041	ProteinID:KRH16041	ProteinID:KRH16041.1	PFAM:PF00111
PANTHER:PTHR23426	PANTHER:PTHR23426:SF32	SUPFAM:SSF54292	UniParc:UPI0006ED8158	SEG:seg	:

Description

hypothetical protein

Coordinates

chr14:+:21498405..21501122

Molecular Weight (calculated)

16628.3 Da

IEP (calculated)

9.931

GRAVY (calculated)

-0.302

Length

148 amino acids

Sequence
(BLAST)

001: MASMNLFTTI FLVTDARNPA IYFPRRWRPN TVPFAASSPA SPPEIELEFV GKAKAISGEK LLRNIMLDNK IELYATYGKL MNCGGGGSCG TCIVEILEGK
101: DLLNERTNTE FRYLKKKPES WRLACQTIVG NKENSGKVVV QRIPQWKK

Best Arabidopsis Sequence Match ( AT4G32590.1 )
(BLAST)

001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKVVVQRIPQ WKK

Arabidopsis Description

2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.