CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16041	Soybean	plastid	80.75	87.84
Zm00001d048981_P001	Maize	cytosol	41.61	80.72
HORVU2Hr1G042420.1	Barley	cytosol	57.14	71.32
VIT_04s0008g04240.t01	Wine grape	extracellular	72.05	67.44
PGSC0003DMT400003234	Potato	cytosol, mitochondrion	65.22	67.31
CDX68864	Canola	plastid	62.11	60.24
Bra011358.1-P	Field mustard	plastid	61.49	58.58
CDX75257	Canola	plastid	61.49	58.58
KXG22507	Sorghum	plastid	62.73	56.11
GSMUA_Achr1P14520_001	Banana	plastid	62.73	54.89
AT4G32590.3	Thale cress	plastid	60.25	53.89
TraesCS1A01G383200.1	Wheat	plastid	59.01	52.78
TraesCS1D01G391000.1	Wheat	plastid	59.01	52.2
Zm00001d038946_P001	Maize	plastid	55.9	45.23
TraesCS1B01G409300.1	Wheat	plastid	53.42	44.56
Os05t0555300-01	Rice	plastid	57.76	44.29
Zm00001d027567_P001	Maize	cytosol	37.89	43.88
Zm00001d039288_P001	Maize	cytosol	37.27	43.17
Solyc08g022140.1.1	Tomato	cytosol	21.74	38.46
HORVU1Hr1G084520.15	Barley	nucleus	42.86	30.94
Zm00001d041837_P001	Maize	endoplasmic reticulum, extracellular	25.47	29.93
KRH09910	Soybean	plastid	33.54	27.84
KRH23421	Soybean	mitochondrion, plastid	31.06	25.77

Protein Annotations

EntrezGene:100807125	InterPro:2Fe-2S_ferredoxin-like_sf	InterPro:2Fe-2S_ferredoxin-type	Gene3D:3.10.20.30	MapMan:35.1	EMBL:ACUP02010663
InterPro:Beta-grasp_dom_sf	EnsemblPlantsGene:GLYMA_17G205000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0022900	GO:GO:0051536
UniProt:I1MWM4	InterPro:IPR001041	InterPro:IPR012675	EnsemblPlants:KRH05069	ProteinID:KRH05069	ProteinID:KRH05069.1
PFAM:PF00111	PANTHER:PTHR23426	PANTHER:PTHR23426:SF32	SUPFAM:SSF54292	UniParc:UPI000233F4FC	SEG:seg

Description

hypothetical protein

Coordinates

chr17:-:33317517..33320458

Molecular Weight (calculated)

17765.5 Da

IEP (calculated)

9.202

GRAVY (calculated)

-0.331

Length

161 amino acids

Sequence
(BLAST)

001: MASMSIFTTI SLAADARNPA IYFPRRRQPN TVIFAAASSP ESPPEIELEF IGPKPGSDGS YPVERVKAIS GEKLLRNIML DNKIELYATY GKLMNCAGGG
101: SCGTCIVEII EGKDLLNERT NTELRYLSKK PESWRLACQT IVGNKENSGK VAVQRIPQWK K

Best Arabidopsis Sequence Match ( AT4G32590.1 )
(BLAST)

001: MASLGFNLGF TFSNAQIQQH RKVSGGGRAR VISCNSSSSS SSQASSPQGI SAVTPLEIEL EFFGPKPGSD GSYPVDKAKA VSGDKLLRSI MQDNKIELYA
101: AYGKVMNCGG GGSCGTCIVE ILDGRDLLNE RTDTENRYLK KKPESWRLAC QTIVGNKENS GKVVVQRIPQ WKK

Arabidopsis Description

2Fe-2S ferredoxin-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JUE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.